Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLRN1P58418 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.15□□□□□ -1.43
CLRN1P58418 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLRN1P58418 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.15□□□□□ -1.43
CLRN1P58418 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CLRN1P58418 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.15□□□□□ -1.43
CLRN1P58418 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CLRN1P58418 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
CLRN1P58418 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
CLRN1P58418 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.14□□□□□ -1.43
CLRN1P58418 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.14□□□□□ -1.43
CLRN1P58418 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLRN1P58418 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLRN1P58418 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.14□□□□□ -1.43
CLRN1P58418 SNORA70G-201ENST00000383923 142 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 MIR541-201ENST00000401360 84 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC093422.3-201ENST00000428506 305 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC009518.3-201ENST00000438972 253 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC239800.1-201ENST00000442049 719 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 RPL6P5-201ENST00000445678 828 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AL157884.3-201ENST00000448273 1184 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 CCRL1P1-201ENST00000449542 1053 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.14□□□□□ -1.43
CLRN1P58418 SRP68P2-201ENST00000456184 254 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 RN7SL456P-201ENST00000469290 295 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 RN7SL776P-201ENST00000493390 268 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC010409.2-201ENST00000505780 478 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC011352.2-201ENST00000514574 1016 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 IGLC4-201ENST00000517690 248 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 NF1P12-201ENST00000549593 583 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AL445383.1-201ENST00000554689 874 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 NPM1P5-201ENST00000557228 838 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.14□□□□□ -1.43
CLRN1P58418 MTND3P13-201ENST00000574391 343 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 SNORA70D-201ENST00000578836 135 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC005726.4-201ENST00000582858 458 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.14□□□□□ -1.43
CLRN1P58418 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.14□□□□□ -1.43
CLRN1P58418 AC146944.4-201ENST00000602697 718 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AL133370.2-201ENST00000619934 439 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.14□□□□□ -1.43
CLRN1P58418 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLRN1P58418 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CLRN1P58418 AL133243.4-201ENST00000623116 3109 ntBASIC6.14□□□□□ -1.43
CLRN1P58418 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLRN1P58418 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.13□□□□□ -1.43
CLRN1P58418 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.13□□□□□ -1.43
CLRN1P58418 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CLRN1P58418 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLRN1P58418 LRRC37BP1-201ENST00000398851 714 ntBASIC6.13□□□□□ -1.43
CLRN1P58418 AL662791.3-201ENST00000413771 776 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms