Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXA3P55318 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXA3P55318 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 AC023886.2-201ENST00000321285 411 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 RNA5SP302-201ENST00000364896 100 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AL590635.1-201ENST00000406314 586 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 METTL15P3-201ENST00000415522 1221 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 AL157884.1-201ENST00000424561 454 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 CYCSP51-201ENST00000443545 318 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 RPL23AP60-201ENST00000450011 454 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXA3P55318 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXA3P55318 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXA3P55318 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXA3P55318 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 AC107952.1-201ENST00000524200 376 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 OR8Q1P-201ENST00000526467 655 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXA3P55318 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXA3P55318 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXA3P55318 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 AC024614.1-201ENST00000577546 307 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXA3P55318 MIR4262-201ENST00000578394 54 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 MIR378C-201ENST00000578683 81 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AL589863.1-201ENST00000595383 631 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 AL592504.1-201ENST00000605319 439 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 SNORD96A-201ENST00000606577 79 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXA3P55318 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXA3P55318 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 pRNA.9-201ENST00000618609 89 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AC010320.5-201ENST00000619124 676 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 MRPL57P3-201ENST00000619218 176 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 BX005040.2-201ENST00000620504 370 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AC013489.3-201ENST00000623274 517 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AC133485.6-201ENST00000624045 688 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AC005858.3-201ENST00000624756 589 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AC079776.5-201ENST00000641920 211 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 AC005261.6-201ENST00000623072 1387 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXA3P55318 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXA3P55318 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXA3P55318 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 AC005224.3-201ENST00000584683 2140 ntBASIC4.6□□□□□ -1.67
FOXA3P55318 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXA3P55318 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXA3P55318 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
FOXA3P55318 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXA3P55318 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXA3P55318 SNORA30B-201ENST00000365319 129 ntBASIC4.59□□□□□ -1.67
FOXA3P55318 MIR99A-201ENST00000384906 81 ntBASIC4.59□□□□□ -1.67
FOXA3P55318 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
FOXA3P55318 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXA3P55318 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXA3P55318 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXA3P55318 AC245096.1-201ENST00000413104 546 ntBASIC4.59□□□□□ -1.67
FOXA3P55318 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXA3P55318 AC092066.1-201ENST00000425131 317 ntBASIC4.59□□□□□ -1.67
FOXA3P55318 RPS27AP6-201ENST00000427962 448 ntBASIC4.59□□□□□ -1.67
FOXA3P55318 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXA3P55318 AC027124.1-201ENST00000440852 466 ntBASIC4.59□□□□□ -1.67
FOXA3P55318 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXA3P55318 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.59□□□□□ -1.67
FOXA3P55318 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXA3P55318 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXA3P55318 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXA3P55318 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms