Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 AC126474.2-201ENST00000623268 1750 ntBASIC7.89□□□□□ -1.15
USP11P51784 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 AC092111.1-201ENST00000618256 3358 ntBASIC7.89□□□□□ -1.15
USP11P51784 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USP11P51784 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 AL034417.4-202ENST00000642135 2236 ntBASIC7.89□□□□□ -1.15
USP11P51784 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USP11P51784 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 RNU6-618P-201ENST00000363518 112 ntBASIC7.89□□□□□ -1.15
USP11P51784 SNORD115-48-201ENST00000364764 76 ntBASIC7.89□□□□□ -1.15
USP11P51784 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 RAP1BP3-201ENST00000407180 549 ntBASIC7.89□□□□□ -1.15
USP11P51784 NPM1P36-201ENST00000415681 835 ntBASIC7.89□□□□□ -1.15
USP11P51784 RAD23BP2-201ENST00000416003 1207 ntBASIC7.89□□□□□ -1.15
USP11P51784 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 YWHAZP5-201ENST00000419975 730 ntBASIC7.89□□□□□ -1.15
USP11P51784 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 AC009303.1-201ENST00000426307 352 ntBASIC7.89□□□□□ -1.15
USP11P51784 AC005345.1-201ENST00000431868 217 ntBASIC7.89□□□□□ -1.15
USP11P51784 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.89□□□□□ -1.15
USP11P51784 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.89□□□□□ -1.15
USP11P51784 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.89□□□□□ -1.15
USP11P51784 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 AL133217.1-201ENST00000450980 425 ntBASIC7.89□□□□□ -1.15
USP11P51784 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.89□□□□□ -1.15
USP11P51784 AL096803.1-201ENST00000456921 1021 ntBASIC7.89□□□□□ -1.15
USP11P51784 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 AC021074.2-201ENST00000468434 172 ntBASIC7.89□□□□□ -1.15
USP11P51784 PPP1R2P6-201ENST00000478565 588 ntBASIC7.89□□□□□ -1.15
USP11P51784 RPS3AP22-201ENST00000488297 769 ntBASIC7.89□□□□□ -1.15
USP11P51784 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.89□□□□□ -1.15
USP11P51784 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
USP11P51784 RPL41P2-201ENST00000544920 409 ntBASIC7.89□□□□□ -1.15
USP11P51784 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 DPPA3P2-201ENST00000553589 478 ntBASIC7.89□□□□□ -1.15
USP11P51784 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.89□□□□□ -1.15
USP11P51784 MTATP6P3-201ENST00000581686 676 ntBASIC7.89□□□□□ -1.15
USP11P51784 OR7E19P-202ENST00000589942 844 ntBASIC7.89□□□□□ -1.15
USP11P51784 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 AC022106.1-201ENST00000612834 766 ntBASIC7.89□□□□□ -1.15
USP11P51784 AC026951.2-201ENST00000613847 241 ntBASIC7.89□□□□□ -1.15
USP11P51784 MIR6883-201ENST00000614952 78 ntBASIC7.89□□□□□ -1.15
USP11P51784 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 AC005355.2-201ENST00000625064 484 ntBASIC7.89□□□□□ -1.15
USP11P51784 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USP11P51784 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
USP11P51784 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.89□□□□□ -1.15
USP11P51784 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 AC053481.2-202ENST00000582394 1500 ntBASIC7.88□□□□□ -1.15
USP11P51784 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 TRIM53CP-201ENST00000531490 1354 ntBASIC7.88□□□□□ -1.15
USP11P51784 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.88□□□□□ -1.15
USP11P51784 RPL12P13-201ENST00000310055 497 ntBASIC7.88□□□□□ -1.15
USP11P51784 RN7SKP28-201ENST00000364770 305 ntBASIC7.88□□□□□ -1.15
USP11P51784 RNA5SP442-201ENST00000365050 107 ntBASIC7.88□□□□□ -1.15
USP11P51784 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.88□□□□□ -1.15
USP11P51784 AL360013.1-201ENST00000419031 858 ntBASIC7.88□□□□□ -1.15
USP11P51784 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.88□□□□□ -1.15
USP11P51784 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USP11P51784 AL358794.1-201ENST00000445689 381 ntBASIC7.88□□□□□ -1.15
USP11P51784 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms