Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
MRE11P49959 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
MRE11P49959 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
MRE11P49959 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 RNA5SP260-201ENST00000363849 111 ntBASIC7.68□□□□□ -1.18
MRE11P49959 RNA5SP472-201ENST00000363868 119 ntBASIC7.68□□□□□ -1.18
MRE11P49959 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 RPL12P1-201ENST00000374520 498 ntBASIC7.68□□□□□ -1.18
MRE11P49959 MIR187-201ENST00000385062 109 ntBASIC7.68□□□□□ -1.18
MRE11P49959 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 AL391419.1-201ENST00000398901 1275 ntBASIC7.68□□□□□ -1.18
MRE11P49959 GTF3AP1-201ENST00000416942 1004 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 RPSAP40-201ENST00000442343 891 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.68□□□□□ -1.18
MRE11P49959 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 AC068491.1-201ENST00000449539 1241 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 AC018892.2-201ENST00000457656 693 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC025181.1-201ENST00000477507 416 ntBASIC7.68□□□□□ -1.18
MRE11P49959 RN7SL868P-201ENST00000485915 303 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC114728.1-201ENST00000488289 483 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AGGF1P3-201ENST00000493675 1213 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 AC110760.3-202ENST00000515177 371 ntBASIC7.68□□□□□ -1.18
MRE11P49959 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.68□□□□□ -1.18
MRE11P49959 OR4R2P-201ENST00000530815 597 ntBASIC7.68□□□□□ -1.18
MRE11P49959 CR383656.14-201ENST00000551951 406 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC051619.2-201ENST00000559063 397 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.68□□□□□ -1.18
MRE11P49959 MIR3157-201ENST00000578688 85 ntBASIC7.68□□□□□ -1.18
MRE11P49959 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.68□□□□□ -1.18
MRE11P49959 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
MRE11P49959 AC098483.2-201ENST00000603158 454 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AC009948.4-201ENST00000604692 675 ntBASIC7.68□□□□□ -1.18
MRE11P49959 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.68□□□□□ -1.18
MRE11P49959 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
MRE11P49959 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 AC015799.1-201ENST00000622996 3122 ntBASIC7.68□□□□□ -1.18
MRE11P49959 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.68□□□□□ -1.18
MRE11P49959 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
MRE11P49959 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MRE11P49959 AC011815.2-201ENST00000618230 2021 ntBASIC7.68□□□□□ -1.18
MRE11P49959 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
MRE11P49959 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 ZNF101P1-201ENST00000435701 1720 ntBASIC7.67□□□□□ -1.18
MRE11P49959 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
MRE11P49959 SNORA73B-201ENST00000363217 204 ntBASIC7.67□□□□□ -1.18
MRE11P49959 SNORA51.1-201ENST00000363243 140 ntBASIC7.67□□□□□ -1.18
MRE11P49959 SNORA72.3-201ENST00000365074 132 ntBASIC7.67□□□□□ -1.18
MRE11P49959 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 SNORA70.8-201ENST00000384231 136 ntBASIC7.67□□□□□ -1.18
MRE11P49959 RNU11-201ENST00000387069 134 ntBASIC7.67□□□□□ -1.18
MRE11P49959 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
MRE11P49959 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MRE11P49959 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.67□□□□□ -1.18
MRE11P49959 AC009237.1-201ENST00000442127 744 ntBASIC7.67□□□□□ -1.18
MRE11P49959 RPL34P34-201ENST00000465389 354 ntBASIC7.67□□□□□ -1.18
MRE11P49959 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.67□□□□□ -1.18
MRE11P49959 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 AC114322.1-201ENST00000506771 926 ntBASIC7.67□□□□□ -1.18
MRE11P49959 AC083906.1-201ENST00000509298 406 ntBASIC7.67□□□□□ -1.18
MRE11P49959 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.67□□□□□ -1.18
MRE11P49959 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.67□□□□□ -1.18
MRE11P49959 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.67□□□□□ -1.18
MRE11P49959 RNA5SP278-201ENST00000517055 102 ntBASIC7.67□□□□□ -1.18
MRE11P49959 IGHV1-14-201ENST00000523391 241 ntBASIC7.67□□□□□ -1.18
MRE11P49959 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms