Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SSR1P43307 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.79□□□□□ -1.32
SSR1P43307 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.79□□□□□ -1.32
SSR1P43307 AC068408.1-201ENST00000577406 1144 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.79□□□□□ -1.32
SSR1P43307 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.79□□□□□ -1.32
SSR1P43307 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.79□□□□□ -1.32
SSR1P43307 AC245052.7-201ENST00000601161 359 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC012175.1-201ENST00000603755 531 ntBASIC6.79□□□□□ -1.32
SSR1P43307 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.79□□□□□ -1.32
SSR1P43307 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 AC027506.1-201ENST00000621395 198 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC004836.1-201ENST00000623032 634 ntBASIC6.79□□□□□ -1.32
SSR1P43307 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.79□□□□□ -1.32
SSR1P43307 AP000473.2-201ENST00000602659 1537 ntBASIC6.79□□□□□ -1.32
SSR1P43307 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.79□□□□□ -1.32
SSR1P43307 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SSR1P43307 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SSR1P43307 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.79□□□□□ -1.32
SSR1P43307 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 AC092724.1-201ENST00000624623 3397 ntBASIC6.78□□□□□ -1.32
SSR1P43307 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SSR1P43307 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.78□□□□□ -1.32
SSR1P43307 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SSR1P43307 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SSR1P43307 SNORA7A-201ENST00000384765 139 ntBASIC6.78□□□□□ -1.32
SSR1P43307 FDPSP5-201ENST00000399474 1057 ntBASIC6.78□□□□□ -1.32
SSR1P43307 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.78□□□□□ -1.32
SSR1P43307 RN7SL372P-201ENST00000461982 298 ntBASIC6.78□□□□□ -1.32
SSR1P43307 AL079303.1-201ENST00000486611 463 ntBASIC6.78□□□□□ -1.32
SSR1P43307 AC131392.1-201ENST00000506490 633 ntBASIC6.78□□□□□ -1.32
SSR1P43307 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.78□□□□□ -1.32
SSR1P43307 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.78□□□□□ -1.32
SSR1P43307 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.78□□□□□ -1.32
SSR1P43307 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.78□□□□□ -1.32
SSR1P43307 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.78□□□□□ -1.32
SSR1P43307 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.78□□□□□ -1.32
SSR1P43307 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.78□□□□□ -1.32
SSR1P43307 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.78□□□□□ -1.32
SSR1P43307 AC024255.1-201ENST00000614376 102 ntBASIC6.78□□□□□ -1.32
SSR1P43307 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.78□□□□□ -1.32
SSR1P43307 AC099654.6-201ENST00000636487 512 ntBASIC6.78□□□□□ -1.32
SSR1P43307 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SSR1P43307 SAGE3P-201ENST00000619800 1635 ntBASIC6.78□□□□□ -1.32
SSR1P43307 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
SSR1P43307 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SSR1P43307 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSR1P43307 AC011369.2-201ENST00000624423 1567 ntBASIC6.78□□□□□ -1.32
SSR1P43307 SMG1P5-202ENST00000529428 4219 ntBASIC6.77□□□□□ -1.32
SSR1P43307 SMG1P2-201ENST00000566127 4221 ntBASIC6.77□□□□□ -1.32
SSR1P43307 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SSR1P43307 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
SSR1P43307 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SSR1P43307 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.77□□□□□ -1.33
SSR1P43307 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.77□□□□□ -1.33
SSR1P43307 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SSR1P43307 RNA5SP251-201ENST00000410614 137 ntBASIC6.77□□□□□ -1.33
SSR1P43307 MEAF6P1-201ENST00000416092 327 ntBASIC6.77□□□□□ -1.33
SSR1P43307 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.77□□□□□ -1.33
SSR1P43307 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 E2F6P1-201ENST00000428850 745 ntBASIC6.77□□□□□ -1.33
SSR1P43307 RPL5P2-201ENST00000429598 854 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 E2F6P3-201ENST00000441743 743 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AL354872.1-201ENST00000456361 967 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AKR1D1P1-201ENST00000457236 936 ntBASIC6.77□□□□□ -1.33
SSR1P43307 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.77□□□□□ -1.33
SSR1P43307 RPS3AP49-201ENST00000472161 790 ntBASIC6.77□□□□□ -1.33
SSR1P43307 RN7SL350P-201ENST00000492591 299 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AC009567.2-201ENST00000502989 349 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms