Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
HOXC9P31274 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXC9P31274 RPS15AP30-201ENST00000420976 390 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 AC064862.4-201ENST00000442180 334 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.15□□□□□ -1.1
HOXC9P31274 RPS27AP2-201ENST00000457576 465 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
HOXC9P31274 AL122020.1-201ENST00000472287 459 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 RN7SL177P-201ENST00000476596 299 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.15□□□□□ -1.1
HOXC9P31274 WBP1LP3-201ENST00000523033 208 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.15□□□□□ -1.1
HOXC9P31274 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.15□□□□□ -1.1
HOXC9P31274 GNG2-208ENST00000554875 430 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXC9P31274 SNORD95-201ENST00000579879 68 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXC9P31274 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXC9P31274 RN7SL787P-201ENST00000613000 284 ntBASIC8.15□□□□□ -1.1
HOXC9P31274 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXC9P31274 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXC9P31274 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXC9P31274 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HOXC9P31274 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HOXC9P31274 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.15□□□□□ -1.1
HOXC9P31274 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HOXC9P31274 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXC9P31274 TNPO1P2-201ENST00000426249 2665 ntBASIC8.15□□□□□ -1.11
HOXC9P31274 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
HOXC9P31274 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
HOXC9P31274 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
HOXC9P31274 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXC9P31274 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXC9P31274 AC106872.5-201ENST00000508856 1416 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 FUNDC2P3-201ENST00000334716 533 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 RNA5SP500-201ENST00000364486 119 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 U3.25-201ENST00000391209 220 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXC9P31274 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXC9P31274 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
HOXC9P31274 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXC9P31274 DNAJC19P5-201ENST00000443295 316 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 AC016027.4-201ENST00000450866 277 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.14□□□□□ -1.11
HOXC9P31274 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXC9P31274 AC022467.1-201ENST00000614738 749 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXC9P31274 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXC9P31274 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
HOXC9P31274 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXC9P31274 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
HOXC9P31274 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.14□□□□□ -1.11
HOXC9P31274 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXC9P31274 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXC9P31274 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXC9P31274 UGT2B27P-201ENST00000505092 1620 ntBASIC8.14□□□□□ -1.11
HOXC9P31274 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.14□□□□□ -1.11
HOXC9P31274 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
HOXC9P31274 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
HOXC9P31274 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HOXC9P31274 AC011815.2-201ENST00000618230 2021 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXC9P31274 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXC9P31274 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 HDAC1P2-201ENST00000453661 1398 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXC9P31274 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXC9P31274 AL133243.4-201ENST00000623116 3109 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HOXC9P31274 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXC9P31274 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HOXC9P31274 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXC9P31274 RNU105B-201ENST00000364478 208 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 RN7SKP286-201ENST00000410894 299 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXC9P31274 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC009237.1-201ENST00000442127 744 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 RPS26P39-201ENST00000469206 341 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 AC124945.1-201ENST00000485133 188 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXC9P31274 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.13□□□□□ -1.11
HOXC9P31274 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXC9P31274 PCNAP4-201ENST00000532690 730 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC090022.1-201ENST00000546569 311 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 AL356801.1-201ENST00000559320 294 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 AC012254.3-201ENST00000591183 2117 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXC9P31274 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HOXC9P31274 OR8G3P-202ENST00000641572 1255 ntBASIC8.13□□□□□ -1.11
HOXC9P31274 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.13□□□□□ -1.11
HOXC9P31274 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms