Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNA5SP156-201ENST00000410250 110 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.84□□□□□ -1.31
HOXC8P31273 RPL35AP31-201ENST00000418340 337 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 BX284632.2-201ENST00000421091 399 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.84□□□□□ -1.31
HOXC8P31273 GAPDHP23-201ENST00000444823 993 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 VPS25P1-201ENST00000455691 508 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HOXC8P31273 AC011411.1-201ENST00000509592 876 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.84□□□□□ -1.31
HOXC8P31273 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.84□□□□□ -1.31
HOXC8P31273 AP000648.1-201ENST00000529682 397 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.84□□□□□ -1.31
HOXC8P31273 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 AC233702.7-202ENST00000582941 211 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 AC008555.7-201ENST00000605008 583 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 AL031601.1-201ENST00000605702 394 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 FAM72A-208ENST00000607379 1139 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 AC006924.1-201ENST00000610750 559 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 AL445649.1-201ENST00000615941 691 ntBASIC6.84□□□□□ -1.31
HOXC8P31273 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HOXC8P31273 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HOXC8P31273 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC8P31273 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
HOXC8P31273 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HOXC8P31273 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
HOXC8P31273 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 MAPK10-323ENST00000641493 3207 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 RNA5SP510-201ENST00000364697 99 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AL445238.1-204ENST00000400311 463 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AL132875.1-201ENST00000403623 949 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 MIR1203-201ENST00000408812 85 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 NDUFS5P5-201ENST00000437256 321 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC106872.4-201ENST00000510050 523 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC073916.1-201ENST00000545095 130 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.83□□□□□ -1.32
HOXC8P31273 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXC8P31273 MRPS21P9-201ENST00000571150 257 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AC020978.7-201ENST00000575953 1187 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AC005244.1-201ENST00000582566 339 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AC027229.1-201ENST00000583887 253 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.83□□□□□ -1.32
HOXC8P31273 AP000894.4-201ENST00000610185 483 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AL357153.4-201ENST00000620487 1016 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 AC012254.5-201ENST00000623573 478 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC110597.1-201ENST00000562669 3176 ntBASIC6.83□□□□□ -1.32
HOXC8P31273 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC8P31273 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXC8P31273 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC8P31273 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXC8P31273 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXC8P31273 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HOXC8P31273 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms