Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40LGP29965 AC111000.6-201ENST00000514471 709 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 RNA5SP318-201ENST00000516352 92 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 IGLC4-201ENST00000517690 248 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 AC100854.1-201ENST00000520351 341 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 OR5M4P-201ENST00000529436 925 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40LGP29965 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.56□□□□□ -1.52
CD40LGP29965 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40LGP29965 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40LGP29965 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.56□□□□□ -1.52
CD40LGP29965 RN7SL657P-201ENST00000582431 293 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 MIR132-201ENST00000591554 101 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40LGP29965 ACTG1P22-201ENST00000603793 1099 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40LGP29965 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40LGP29965 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40LGP29965 AC009962.1-201ENST00000567327 3813 ntBASIC5.56□□□□□ -1.52
CD40LGP29965 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40LGP29965 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40LGP29965 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CD40LGP29965 AC005261.6-201ENST00000623072 1387 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC010266.2-201ENST00000564741 3255 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC011416.1-201ENST00000514947 1732 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40LGP29965 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD40LGP29965 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD40LGP29965 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CD40LGP29965 RNA5SP177-201ENST00000410122 107 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AL161742.1-201ENST00000418154 584 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 SNRPEP5-201ENST00000425442 278 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AL354707.3-201ENST00000427308 331 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AL136231.1-201ENST00000429407 730 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40LGP29965 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC009518.3-201ENST00000438972 253 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 MED28P3-201ENST00000444288 531 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 TUBBP11-201ENST00000472255 252 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC091982.1-202ENST00000473923 343 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 RPL5P15-201ENST00000475870 897 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.55□□□□□ -1.52
CD40LGP29965 CHCHD2P7-201ENST00000508008 452 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC090958.1-201ENST00000511122 351 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC134698.1-201ENST00000511619 643 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 RNA5SP400-201ENST00000517155 111 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC021820.1-201ENST00000525564 808 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AP001803.1-201ENST00000525668 147 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.55□□□□□ -1.52
CD40LGP29965 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40LGP29965 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 PPIAP14-201ENST00000577627 496 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 AC010487.1-201ENST00000594408 1172 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40LGP29965 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.55□□□□□ -1.52
CD40LGP29965 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.55□□□□□ -1.52
CD40LGP29965 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 AC007842.1-201ENST00000597336 2039 ntBASIC5.55□□□□□ -1.52
CD40LGP29965 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CD40LGP29965 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.55□□□□□ -1.52
CD40LGP29965 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40LGP29965 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.54□□□□□ -1.52
CD40LGP29965 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD40LGP29965 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40LGP29965 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.54□□□□□ -1.52
CD40LGP29965 VIM2P-201ENST00000402383 1294 ntBASIC5.54□□□□□ -1.52
CD40LGP29965 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40LGP29965 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.54□□□□□ -1.52
CD40LGP29965 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms