Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.96□□□□□ -1.46
CLPTM1O96005 SCARNA11.1-201ENST00000516918 132 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 IGLC4-201ENST00000517690 248 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 CARSP2-201ENST00000520688 277 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 OR7E158P-201ENST00000524483 910 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AC021820.1-201ENST00000525564 808 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC026458.1-201ENST00000564330 438 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AL356986.1-201ENST00000604085 341 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AL353729.2-201ENST00000605859 1249 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLPTM1O96005 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AL354950.1-201ENST00000614150 568 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.96□□□□□ -1.46
CLPTM1O96005 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLPTM1O96005 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLPTM1O96005 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC092692.1-201ENST00000623625 2595 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CLPTM1O96005 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.96□□□□□ -1.46
CLPTM1O96005 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.96□□□□□ -1.46
CLPTM1O96005 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.95□□□□□ -1.46
CLPTM1O96005 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLPTM1O96005 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC102941.1-201ENST00000567616 1537 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 ADAM24P-201ENST00000398655 2101 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
CLPTM1O96005 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 SNORD1C-201ENST00000363315 78 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 AL136100.1-201ENST00000407696 330 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLPTM1O96005 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 RN7SKP151-201ENST00000410230 316 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 RN7SKP129-201ENST00000410288 299 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC015977.1-201ENST00000418887 292 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 CHCHD4P5-201ENST00000436684 427 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLPTM1O96005 MEF2AP1-201ENST00000454867 863 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 OSTCP1-201ENST00000455507 450 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 AL096803.1-201ENST00000456921 1021 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 RN7SL552P-201ENST00000462094 276 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 PPP1R2P6-201ENST00000478565 588 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 NPM1P21-201ENST00000513394 762 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 RNU6-751P-201ENST00000516382 101 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC007671.1-201ENST00000616957 830 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 AL512356.3-201ENST00000623005 461 ntBASIC5.95□□□□□ -1.46
CLPTM1O96005 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.95□□□□□ -1.46
CLPTM1O96005 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLPTM1O96005 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.94□□□□□ -1.46
CLPTM1O96005 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.94□□□□□ -1.46
CLPTM1O96005 AP000473.2-201ENST00000602659 1537 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms