Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC8.88□□□□□ -0.99
RNF40O75150 RN7SL370P-201ENST00000470869 295 ntBASIC8.88□□□□□ -0.99
RNF40O75150 FTH1P4-201ENST00000480365 553 ntBASIC8.88□□□□□ -0.99
RNF40O75150 RN7SL745P-201ENST00000484900 299 ntBASIC8.88□□□□□ -0.99
RNF40O75150 FAM172BP-201ENST00000487497 1089 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 RNU6-943P-201ENST00000516960 98 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.88□□□□□ -0.99
RNF40O75150 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.88□□□□□ -0.99
RNF40O75150 AC005262.1-201ENST00000588562 362 ntBASIC8.88□□□□□ -0.99
RNF40O75150 BNIP3P22-201ENST00000593399 556 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 AC233280.2-201ENST00000603917 1070 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AL035413.2-201ENST00000604801 525 ntBASIC8.88□□□□□ -0.99
RNF40O75150 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 RBM22P6-201ENST00000611682 867 ntBASIC8.88□□□□□ -0.99
RNF40O75150 MIR6872-201ENST00000612981 62 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 MTCO1P9-201ENST00000505577 1534 ntBASIC8.88□□□□□ -0.99
RNF40O75150 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 AC079097.1-201ENST00000512187 1399 ntBASIC8.87□□□□□ -0.99
RNF40O75150 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
RNF40O75150 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
RNF40O75150 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RNF40O75150 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RNF40O75150 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
RNF40O75150 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 RNU1-28P-201ENST00000383861 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RNU1-27P-201ENST00000383869 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RNU1-1-201ENST00000383925 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RNVU1-18-201ENST00000384010 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RNU1-2-201ENST00000384278 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RNU1-4-201ENST00000384659 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RNU1-3-201ENST00000384782 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RN7SKP58-201ENST00000411010 305 ntBASIC8.87□□□□□ -0.99
RNF40O75150 PIGPP2-201ENST00000411569 458 ntBASIC8.87□□□□□ -0.99
RNF40O75150 PPIAP2-201ENST00000414143 492 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RPS3AP9-201ENST00000417027 792 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC066692.1-201ENST00000421721 457 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC069157.1-201ENST00000421749 137 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.87□□□□□ -0.99
RNF40O75150 AC096632.2-201ENST00000438139 1239 ntBASIC8.87□□□□□ -0.99
RNF40O75150 BUD31P2-201ENST00000449374 300 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RAD23BP3-201ENST00000454157 1152 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC115223.1-201ENST00000466377 870 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RN7SL63P-201ENST00000468228 304 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC117392.1-201ENST00000487061 596 ntBASIC8.87□□□□□ -0.99
RNF40O75150 RN7SL280P-201ENST00000496490 288 ntBASIC8.87□□□□□ -0.99
RNF40O75150 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.87□□□□□ -0.99
RNF40O75150 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.87□□□□□ -0.99
RNF40O75150 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 AL157687.1-201ENST00000554853 619 ntBASIC8.87□□□□□ -0.99
RNF40O75150 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RNF40O75150 AL121821.2-201ENST00000556081 394 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC8.87□□□□□ -0.99
RNF40O75150 HMGB1P33-201ENST00000563485 527 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.87□□□□□ -0.99
RNF40O75150 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.87□□□□□ -0.99
RNF40O75150 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 AC113554.1-201ENST00000606284 490 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC093458.1-201ENST00000608912 222 ntBASIC8.87□□□□□ -0.99
RNF40O75150 U1.40-201ENST00000610976 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 U1.27-201ENST00000615842 164 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AC018816.2-201ENST00000621460 353 ntBASIC8.87□□□□□ -0.99
RNF40O75150 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.87□□□□□ -0.99
RNF40O75150 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.87□□□□□ -0.99
RNF40O75150 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.87□□□□□ -0.99
RNF40O75150 MIR6863-201ENST00000636112 90 ntBASIC8.87□□□□□ -0.99
RNF40O75150 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
RNF40O75150 AL365475.1-201ENST00000565135 1949 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms