Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.95□□□□□ -1.62
SSSCA1O60232 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SSSCA1O60232 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 SNORA77.2-201ENST00000408571 112 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 RNU2-5P-201ENST00000410533 180 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 RN7SKP91-201ENST00000410852 288 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 RPL12P10-201ENST00000413498 498 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 RPL18AP14-201ENST00000417685 526 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC092106.2-201ENST00000436597 487 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.95□□□□□ -1.62
SSSCA1O60232 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 RPL21P42-201ENST00000488408 464 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.95□□□□□ -1.62
SSSCA1O60232 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 ENPP7P3-201ENST00000509123 241 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 OR8Q1P-201ENST00000526467 655 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC005519.1-201ENST00000554490 601 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 AC005224.3-201ENST00000584683 2140 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC024085.1-201ENST00000604299 432 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 AC114774.1-201ENST00000507410 1770 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
SSSCA1O60232 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SSSCA1O60232 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC024587.1-201ENST00000505925 2157 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.94□□□□□ -1.62
SSSCA1O60232 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 RN7SKP128-201ENST00000364270 303 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 U3.10-201ENST00000364459 214 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 RN7SKP1-201ENST00000365525 307 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.94□□□□□ -1.62
SSSCA1O60232 OR52S1P-201ENST00000427016 937 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 AC009362.1-201ENST00000427253 406 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 AC083862.1-201ENST00000427378 1242 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 RPL3P11-201ENST00000434028 1146 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 RPSAP40-201ENST00000442343 891 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 AL020997.1-201ENST00000446554 349 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 AL121578.2-201ENST00000448797 447 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.94□□□□□ -1.62
SSSCA1O60232 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SSSCA1O60232 PPP1R11P1-201ENST00000486095 376 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 RPL5P3-201ENST00000493817 889 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 AC106760.2-201ENST00000504159 619 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 OR51A1P-201ENST00000511110 946 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 RN7SKP196-201ENST00000516267 345 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC133552.4-201ENST00000576103 676 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 SYPL1P2-201ENST00000582878 727 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 RN7SL475P-201ENST00000583379 298 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC060780.2-201ENST00000589047 198 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.94□□□□□ -1.62
SSSCA1O60232 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC018628.1-201ENST00000624147 3819 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC079776.5-201ENST00000641920 211 ntBASIC4.94□□□□□ -1.62
SSSCA1O60232 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.94□□□□□ -1.62
SSSCA1O60232 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SSSCA1O60232 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSSCA1O60232 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms