Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 RN7SL208P-201ENST00000577964 296 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC139792.1-201ENST00000607051 647 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 MIR6731-201ENST00000614863 72 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC096708.4-201ENST00000620563 552 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC106782.7-201ENST00000624024 418 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC133555.5-201ENST00000624430 418 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC005618.4-201ENST00000625053 554 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AC011416.1-201ENST00000514947 1732 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 AL158152.1-201ENST00000602652 1435 ntBASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RBFOX3A6NFN3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC026523.2-201ENST00000625039 7739 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RNU4-81P-201ENST00000363561 144 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 TRAV35-201ENST00000390462 330 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RNA5SP53-201ENST00000391299 120 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 NACAP7-201ENST00000407371 609 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 SNX18P13-201ENST00000412442 529 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AL929472.1-201ENST00000417484 429 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 DBIL5P2-201ENST00000443827 253 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AL096803.1-201ENST00000456921 1021 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RN7SL197P-201ENST00000466981 299 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC090589.1-201ENST00000473109 362 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC131392.1-201ENST00000506490 633 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 COX6B1P4-201ENST00000519826 484 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RPA2P3-201ENST00000533268 770 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ZNF322P1-201ENST00000568013 1209 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ANP32BP1-202ENST00000568553 737 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC024614.1-201ENST00000577546 307 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 RN7SL657P-201ENST00000582431 293 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AL136139.1-201ENST00000605568 222 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC007204.1-201ENST00000621794 555 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC005355.2-201ENST00000625064 484 ntBASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.88□□□□□ -1.63
RBFOX3A6NFN3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 AL161756.3-201ENST00000641216 2071 ntBASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 AC012078.1-201ENST00000405035 1646 ntBASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 AP001029.2-203ENST00000589795 4910 ntBASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 FDPSP5-201ENST00000399474 1057 ntBASIC4.87□□□□□ -1.63
RBFOX3A6NFN3 RN7SKP30-201ENST00000411373 334 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms