Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC129502.1-201ENST00000623261 1654 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 U3.23-201ENST00000391132 200 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL050305.1-201ENST00000399993 1230 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 GTF2IP5-201ENST00000414608 731 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 MTCO2P23-201ENST00000425216 680 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 ARL5AP3-201ENST00000439327 386 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC021146.5-201ENST00000503544 545 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 HMGB1P47-201ENST00000511281 589 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 UBTFL9-201ENST00000534504 1148 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 MIR4685-201ENST00000578185 69 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 MIR3159-201ENST00000584572 74 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 DIMT1P1-201ENST00000603970 763 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC113361.1-201ENST00000606683 543 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL137246.2-201ENST00000613439 662 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AC025016.1-201ENST00000616746 682 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 TATDN2P3-201ENST00000452855 3665 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 CASC19-255ENST00000641733 1385 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 AL731556.1-201ENST00000394628 3711 ntBASIC7.3□□□□□ -1.24
CCDC66A2RUB6 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CCDC66A2RUB6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AL596268.1-201ENST00000427910 1048 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AK3P5-201ENST00000432033 519 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 snoU109.3-201ENST00000459477 145 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC079594.1-201ENST00000489757 331 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 RN7SL182P-201ENST00000496499 300 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 RBBP4P1-201ENST00000502424 1276 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC011352.2-201ENST00000514574 1016 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC034205.1-201ENST00000520621 638 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC233266.2-201ENST00000567067 528 ntBASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC66A2RUB6 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms