Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TCRBV5S1A1TA0A578 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC068769.1-201ENST00000474767 2426 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 RPL11P4-201ENST00000332269 436 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 RN7SKP237-201ENST00000364663 301 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 RNA5SP485-201ENST00000365053 119 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC00328-2P-201ENST00000436585 219 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC079922.1-201ENST00000443291 359 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC073594.1-201ENST00000462065 364 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 MARK2P8-201ENST00000476069 952 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 HMGN1P16-201ENST00000508308 283 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 GUSBP9-201ENST00000510138 584 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 CCNHP1-201ENST00000513311 678 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 RNA5SP400-201ENST00000517155 111 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 RN7SL66P-201ENST00000582099 264 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC027334.1-201ENST00000603257 310 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC011891.2-201ENST00000604949 397 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC022919.1-201ENST00000624979 626 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 TMCC1P1-201ENST00000518897 1980 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AC018717.1-201ENST00000457712 1505 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 AP003175.1-201ENST00000641383 6658 ntBASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 PRELID1P1-201ENST00000403549 660 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 PPIAP10-201ENST00000438675 458 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 MTCO3P43-201ENST00000440974 771 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 CXCR2P1-202ENST00000443392 1074 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AC245291.3-201ENST00000443400 292 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 POU5F1P5-201ENST00000445059 658 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AC234771.2-201ENST00000445718 597 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 RPS18P1-201ENST00000447840 458 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 CEACAMP11-201ENST00000455211 583 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 RPS7P10-201ENST00000464254 603 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 RNA5SP434-201ENST00000516647 121 ntBASIC6.53□□□□□ -1.36
TCRBV5S1A1TA0A578 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms