Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 RN7SKP69-201ENST00000365390 305 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 RPLP1P10-201ENST00000413972 339 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 MICG-208ENST00000416822 132 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC239800.1-201ENST00000442049 719 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AL929410.2-201ENST00000451170 189 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC133965.1-201ENST00000452984 354 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 RPL7AP23-201ENST00000482625 776 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC111000.6-201ENST00000514471 709 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 SNRPCP6-201ENST00000528310 210 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC126323.4-201ENST00000566935 234 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC090286.3-201ENST00000573133 187 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC010487.1-201ENST00000594408 1172 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 LSM1P2-201ENST00000604911 322 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 PTCHD3P1-201ENST00000612350 537 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AC116165.3-201ENST00000614524 400 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 MRPL57P3-201ENST00000619218 176 ntBASIC5.65□□□□□ -1.5
HMG20AQ9NP66 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.65□□□□□ -1.5
HMG20AQ9NP66 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.51
HMG20AQ9NP66 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 AC005005.4-201ENST00000623789 16698 ntBASIC5.65□□□□□ -1.51
HMG20AQ9NP66 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMG20AQ9NP66 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 U3.10-201ENST00000364459 214 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 RNU11-6P-201ENST00000391127 133 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 LDHAP5-201ENST00000394996 622 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 RN7SKP117-201ENST00000410175 264 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC117434.1-201ENST00000419971 836 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 SETP9-201ENST00000423837 832 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 IGLV3-4-201ENST00000432300 244 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC003989.1-201ENST00000434569 565 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC099670.2-201ENST00000435130 321 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 PFN1P11-201ENST00000445829 389 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 RN7SL868P-201ENST00000485915 303 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 RPL10P7-201ENST00000495649 625 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC105420.1-201ENST00000504389 582 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC091849.1-201ENST00000509920 121 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 IGKV1D-32-201ENST00000517449 318 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC091304.4-201ENST00000565703 620 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 MIR378C-201ENST00000578683 81 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC006120.1-201ENST00000579375 546 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC009283.1-201ENST00000615852 645 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 MIR6736-201ENST00000616799 59 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 OR7E91P-202ENST00000642062 1198 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC125336.1-201ENST00000508893 2827 ntBASIC5.64□□□□□ -1.51
HMG20AQ9NP66 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.64□□□□□ -1.51
HMG20AQ9NP66 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMG20AQ9NP66 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMG20AQ9NP66 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms