Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 AC097721.1-201ENST00000427150 1253 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 CYCSP51-201ENST00000443545 318 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 SDC4P-201ENST00000453285 601 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 AC007386.1-201ENST00000455212 582 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 AL021368.3-201ENST00000607119 578 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 MROH3P-201ENST00000435735 2676 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 WDR95P-201ENST00000425638 1542 ntBASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK3Q9BYB0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC126120.1-201ENST00000431082 470 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AL133445.1-201ENST00000467051 452 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 RN7SL817P-201ENST00000480777 288 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC008629.2-201ENST00000503783 483 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC022726.2-201ENST00000634673 547 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC087269.2-201ENST00000641764 975 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC105235.1-201ENST00000623208 1816 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 AC011369.2-201ENST00000624423 1567 ntBASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.84□□□□□ -1.15
SHANK3Q9BYB0 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
SHANK3Q9BYB0 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
SHANK3Q9BYB0 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 TNPO1P1-201ENST00000423641 1138 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AL139415.1-201ENST00000424862 352 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 RPL23AP60-201ENST00000450011 454 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 OR4H6P-201ENST00000563771 921 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AL049634.1-201ENST00000453770 1720 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 FBXL21-201ENST00000297158 1305 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 MIR141-201ENST00000384975 95 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 RBMY2KP-201ENST00000418221 992 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AL136981.1-203ENST00000451452 3844 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AL645937.3-201ENST00000453647 936 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AC093890.1-201ENST00000502554 540 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 DUTP7-201ENST00000507982 486 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms