Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC4.41□□□□□ -1.7
LITAFQ99732 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.41□□□□□ -1.7
LITAFQ99732 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 AC011921.2-201ENST00000589465 152 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 AF230666.2-201ENST00000602328 725 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 AP001267.4-201ENST00000602598 545 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 MTCO3P22-201ENST00000603219 784 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 RPP40P2-201ENST00000603596 712 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 AC012213.4-201ENST00000606457 354 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 AC139792.1-201ENST00000607051 647 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 AL512427.1-201ENST00000618593 349 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 AC093875.1-201ENST00000623688 504 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 AC090617.9-201ENST00000623751 147 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.41□□□□□ -1.7
LITAFQ99732 AC073488.7-201ENST00000633785 778 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 Z95114.1-201ENST00000624264 14574 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 MFSD8-256ENST00000641949 1640 ntBASIC4.41□□□□□ -1.7
LITAFQ99732 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.41□□□□□ -1.7
LITAFQ99732 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LITAFQ99732 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.41□□□□□ -1.7
LITAFQ99732 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LITAFQ99732 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LITAFQ99732 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LITAFQ99732 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.41□□□□□ -1.7
LITAFQ99732 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 AC005261.6-201ENST00000623072 1387 ntBASIC4.4□□□□□ -1.7
LITAFQ99732 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 AC232271.1-201ENST00000602455 2715 ntBASIC4.4□□□□□ -1.7
LITAFQ99732 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LITAFQ99732 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.4□□□□□ -1.7
LITAFQ99732 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LITAFQ99732 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 RN7SKP72-201ENST00000362327 292 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 RN7SKP28-201ENST00000364770 305 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 RNU6-354P-201ENST00000383862 107 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 RNU6-610P-201ENST00000384264 107 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LITAFQ99732 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC096533.1-201ENST00000411645 353 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 MTND2P16-201ENST00000419987 799 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC092865.3-201ENST00000425390 1026 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 ATP5G1P5-201ENST00000429024 411 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 AK3P5-201ENST00000432033 519 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 FDPSP8-201ENST00000438304 1089 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 GAPDHP20-201ENST00000444107 1007 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.4□□□□□ -1.71
LITAFQ99732 RPL7P61-201ENST00000451721 751 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.4□□□□□ -1.71
LITAFQ99732 RSU1P1-201ENST00000453416 441 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LITAFQ99732 MEF2AP1-201ENST00000454867 863 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LITAFQ99732 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.4□□□□□ -1.71
LITAFQ99732 SNX18P26-201ENST00000458433 740 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 AC008379.1-201ENST00000463655 464 ntBASIC4.4□□□□□ -1.71
LITAFQ99732 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.4□□□□□ -1.71
LITAFQ99732 RN7SL516P-201ENST00000496127 297 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms