Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTN4IP1Q8WWV3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 SNORD94-201ENST00000386037 137 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AL391419.1-201ENST00000398901 1275 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 NPM1P23-201ENST00000440193 849 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 PPIAP32-201ENST00000449940 472 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AP003385.3-201ENST00000472498 287 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 RPS4XP17-201ENST00000479057 754 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 RN7SL502P-201ENST00000481857 290 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC139713.1-202ENST00000512366 460 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 COX6B1P4-201ENST00000519826 484 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 OR9G2P-201ENST00000533326 880 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MIR3189-201ENST00000578735 73 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 SYPL1P2-201ENST00000582878 727 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC022001.1-201ENST00000605193 268 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MIR6774-201ENST00000614651 70 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MIR6085-201ENST00000618314 110 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC069234.4-201ENST00000621276 412 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MIR6503-201ENST00000622884 86 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MSL3P1-202ENST00000440028 1468 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 AC096921.2-201ENST00000561507 1916 ntBASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.25□□□□□ -1.57
RTN4IP1Q8WWV3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AC005702.3-201ENST00000585345 1447 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL121768.1-201ENST00000613917 2544 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 MIR433-201ENST00000384837 93 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL096800.1-201ENST00000405326 893 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL645939.3-201ENST00000435408 225 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 GAPDHP37-201ENST00000442317 968 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 VPS25P1-201ENST00000455691 508 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 snoU13.29-201ENST00000459370 104 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 RN7SL413P-201ENST00000482700 297 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL035690.1-201ENST00000490892 383 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AC114324.2-202ENST00000503812 134 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 AC008429.4-201ENST00000521201 182 ntBASIC5.24□□□□□ -1.57
RTN4IP1Q8WWV3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms