Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC083855.1-201ENST00000440041 258 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 Z83838.1-202ENST00000456225 839 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 RPL9P15-201ENST00000491096 532 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC008945.1-201ENST00000505144 499 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 SETP17-201ENST00000534163 817 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 NPM1P42-201ENST00000560329 862 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC010287.1-201ENST00000566916 357 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 WDR45BP1-201ENST00000583470 1029 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 MIR5682-201ENST00000584864 76 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC025857.2-201ENST00000602711 238 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 PSMC1P4-201ENST00000515236 1327 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 MIR433-201ENST00000384837 93 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AL391419.1-201ENST00000398901 1275 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC091492.1-201ENST00000419844 272 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 ETF1P1-206ENST00000427296 984 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 GAPDHP33-201ENST00000443168 1013 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC108751.3-201ENST00000461814 1020 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC093719.1-201ENST00000480427 441 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 RN7SL284P-201ENST00000498823 275 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC136777.2-201ENST00000522979 358 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 AC245052.7-201ENST00000601161 359 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 MRPL57P3-201ENST00000619218 176 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 MIR6813-201ENST00000621638 56 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 OR7E91P-202ENST00000642062 1198 ntBASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC112Q8NEF3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
CCDC112Q8NEF3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC112Q8NEF3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC112Q8NEF3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CCDC112Q8NEF3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC112Q8NEF3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms