Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP4Q8N3C7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC232271.1-201ENST00000602455 2715 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 MIPEPP2-201ENST00000422560 1819 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC092724.1-201ENST00000624623 3397 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 OR7A2P-201ENST00000304105 930 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 U3.52-201ENST00000384034 216 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 MIR27A-201ENST00000385073 78 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 FDPSP5-201ENST00000399474 1057 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AL136116.2-201ENST00000404020 785 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 SPATA20P1-201ENST00000423089 438 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RPS10P14-201ENST00000440748 502 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 UBBP5-201ENST00000446970 266 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC009244.1-201ENST00000450566 258 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RPL36AP55-201ENST00000454114 305 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RPL19P11-201ENST00000495944 589 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC091965.3-201ENST00000506236 208 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 MRPL57P6-201ENST00000506570 309 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RNA5SP75-201ENST00000516841 111 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AP002004.1-206ENST00000532441 876 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC026956.1-201ENST00000558741 396 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RN7SL208P-201ENST00000577964 296 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 OR7A8P-201ENST00000595427 913 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 BNIP3P7-201ENST00000605641 516 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RAB28P4-201ENST00000622233 665 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC009831.5-201ENST00000624000 3189 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 AC009220.2-201ENST00000489759 1751 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 NLRP3P1-201ENST00000622303 1785 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.98□□□□□ -1.45
CLIP4Q8N3C7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC105235.1-201ENST00000623208 1816 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL049634.1-201ENST00000453770 1720 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 NPM1P14-201ENST00000343743 866 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 SNORA81-201ENST00000408493 178 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 RPL23AP85-201ENST00000421838 433 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL672212.1-201ENST00000422246 400 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC092646.1-201ENST00000427142 901 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL590399.4-201ENST00000436561 601 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC009237.1-201ENST00000442127 744 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 RN7SKP198-201ENST00000459286 306 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 RN7SL372P-201ENST00000461982 298 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 RN7SL655P-201ENST00000486087 298 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL133372.1-201ENST00000493565 745 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms