Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 FLJ42393-201ENST00000623801 2270 ntBASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 MAPK10-383ENST00000642032 3390 ntBASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD4Q5XG99 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 RNA5SP242-201ENST00000364171 118 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AL132875.1-201ENST00000403623 949 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AL096800.1-201ENST00000405326 893 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 BRWD1P3-201ENST00000428816 390 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 RN7SL717P-201ENST00000478343 297 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC091965.3-201ENST00000506236 208 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC106800.3-201ENST00000511389 308 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC027544.3-201ENST00000535082 757 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC090022.1-201ENST00000546569 311 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC079600.1-201ENST00000550326 297 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC010998.3-201ENST00000613871 631 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AL354950.1-201ENST00000614150 568 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 OR1N1-202ENST00000619659 939 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 MIR7159-201ENST00000620587 66 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 AC007993.1-201ENST00000621298 2430 ntBASIC6.23□□□□□ -1.41
LYSMD4Q5XG99 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 RNA5SP156-201ENST00000410250 110 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 EEF1B2P8-201ENST00000414101 671 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 RPS7P8-201ENST00000418311 581 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms