Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.22□□□□□ -1.41
NKX6-1P78426 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.22□□□□□ -1.41
NKX6-1P78426 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 RPS27AP19-201ENST00000597285 458 ntBASIC6.22□□□□□ -1.41
NKX6-1P78426 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 AC006927.2-201ENST00000639256 389 ntBASIC6.22□□□□□ -1.41
NKX6-1P78426 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NKX6-1P78426 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.22□□□□□ -1.41
NKX6-1P78426 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.22□□□□□ -1.41
NKX6-1P78426 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
NKX6-1P78426 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
NKX6-1P78426 AC078880.4-201ENST00000617627 1749 ntBASIC6.22□□□□□ -1.41
NKX6-1P78426 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NKX6-1P78426 NF1P8-201ENST00000415351 1461 ntBASIC6.22□□□□□ -1.41
NKX6-1P78426 AL359195.2-201ENST00000623657 4412 ntBASIC6.22□□□□□ -1.41
NKX6-1P78426 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.21□□□□□ -1.41
NKX6-1P78426 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.21□□□□□ -1.41
NKX6-1P78426 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.21□□□□□ -1.41
NKX6-1P78426 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.21□□□□□ -1.41
NKX6-1P78426 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NKX6-1P78426 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
NKX6-1P78426 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NKX6-1P78426 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.21□□□□□ -1.41
NKX6-1P78426 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
NKX6-1P78426 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 CCDC150P1-201ENST00000537123 2215 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 RNU6-252P-201ENST00000363232 107 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.21□□□□□ -1.42
NKX6-1P78426 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 RPL12P1-201ENST00000374520 498 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC114402.2-201ENST00000432760 643 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AL157827.1-201ENST00000447622 132 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC004890.1-201ENST00000461005 181 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 PABPC1P10-201ENST00000464731 381 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC023818.1-201ENST00000498379 384 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 AC008967.1-201ENST00000504843 163 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 RNA5SP518-201ENST00000515957 119 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 RN7SKP183-201ENST00000517169 324 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC009729.1-201ENST00000548873 1133 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC023825.1-201ENST00000566704 1030 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 AC010735.1-201ENST00000567305 1026 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.21□□□□□ -1.42
NKX6-1P78426 MTCO2P2-201ENST00000591258 225 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC025171.4-201ENST00000607250 1047 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 RNU6-84P-201ENST00000607737 102 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NKX6-1P78426 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.21□□□□□ -1.42
NKX6-1P78426 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC063952.1-203ENST00000634410 658 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.21□□□□□ -1.42
NKX6-1P78426 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.21□□□□□ -1.42
NKX6-1P78426 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.21□□□□□ -1.42
NKX6-1P78426 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
NKX6-1P78426 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms