Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 ZNF840P-201ENST00000504759 1996 ntBASIC5.18□□□□□ -1.58
LMO4P61968 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LMO4P61968 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO4P61968 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LMO4P61968 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC5.18□□□□□ -1.58
LMO4P61968 AC066692.1-201ENST00000421721 457 ntBASIC5.18□□□□□ -1.58
LMO4P61968 RFESDP1-201ENST00000422350 461 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO4P61968 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.18□□□□□ -1.58
LMO4P61968 OR3D1P-201ENST00000438288 955 ntBASIC5.18□□□□□ -1.58
LMO4P61968 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.18□□□□□ -1.58
LMO4P61968 ATP5LP2-201ENST00000440646 311 ntBASIC5.18□□□□□ -1.58
LMO4P61968 VN1R96P-201ENST00000446052 858 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AC002553.3-201ENST00000453002 341 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AC098847.1-201ENST00000473094 348 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AC025458.1-201ENST00000506046 166 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AL158068.1-201ENST00000506116 616 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO4P61968 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.18□□□□□ -1.58
LMO4P61968 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO4P61968 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 AC009120.3-201ENST00000563335 499 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO4P61968 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.18□□□□□ -1.58
LMO4P61968 AC068768.2-201ENST00000602352 343 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 AC022106.1-201ENST00000612834 766 ntBASIC5.18□□□□□ -1.58
LMO4P61968 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.18□□□□□ -1.58
LMO4P61968 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 AC130448.2-201ENST00000624082 374 ntBASIC5.18□□□□□ -1.58
LMO4P61968 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.18□□□□□ -1.58
LMO4P61968 AC132825.8-201ENST00000640783 297 ntBASIC5.18□□□□□ -1.58
LMO4P61968 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.18□□□□□ -1.58
LMO4P61968 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LMO4P61968 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
LMO4P61968 AP002364.1-201ENST00000623330 3386 ntBASIC5.18□□□□□ -1.58
LMO4P61968 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMO4P61968 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LMO4P61968 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 AC010168.2-201ENST00000562691 5428 ntBASIC5.17□□□□□ -1.58
LMO4P61968 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 RNU1-134P-201ENST00000362935 165 ntBASIC5.17□□□□□ -1.58
LMO4P61968 RNA5SP478-201ENST00000364657 115 ntBASIC5.17□□□□□ -1.58
LMO4P61968 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 TRAV35-201ENST00000390462 330 ntBASIC5.17□□□□□ -1.58
LMO4P61968 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 HMGN1P20-201ENST00000411849 300 ntBASIC5.17□□□□□ -1.58
LMO4P61968 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.17□□□□□ -1.58
LMO4P61968 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 AC006455.6-201ENST00000426192 893 ntBASIC5.17□□□□□ -1.58
LMO4P61968 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.17□□□□□ -1.58
LMO4P61968 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.17□□□□□ -1.58
LMO4P61968 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.17□□□□□ -1.58
LMO4P61968 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.17□□□□□ -1.58
LMO4P61968 VPS25P1-201ENST00000455691 508 ntBASIC5.17□□□□□ -1.58
LMO4P61968 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.17□□□□□ -1.58
LMO4P61968 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.17□□□□□ -1.58
LMO4P61968 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 SUMO2P7-201ENST00000511179 285 ntBASIC5.17□□□□□ -1.58
LMO4P61968 CR383658.1-201ENST00000514609 734 ntBASIC5.17□□□□□ -1.58
LMO4P61968 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LMO4P61968 RNA5SP434-201ENST00000516647 121 ntBASIC5.17□□□□□ -1.58
LMO4P61968 Y_RNA.710-201ENST00000516975 110 ntBASIC5.17□□□□□ -1.58
LMO4P61968 RNA5SP340-201ENST00000517132 107 ntBASIC5.17□□□□□ -1.58
LMO4P61968 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.17□□□□□ -1.58
LMO4P61968 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.17□□□□□ -1.58
LMO4P61968 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.17□□□□□ -1.58
LMO4P61968 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 635.8 ms