Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 RN7SL66P-201ENST00000582099 264 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC020914.7-201ENST00000594477 545 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AL035410.2-201ENST00000604963 864 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 MIR6885-201ENST00000612241 66 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC244100.4-201ENST00000617747 388 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC007485.2-201ENST00000623493 1667 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 Z95114.1-201ENST00000624264 14574 ntBASIC5.71□□□□□ -1.5
SEC61A1P61619 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A1P61619 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SEC61A1P61619 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A1P61619 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC027575.3-201ENST00000583058 2747 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC119674.1-213ENST00000641177 1386 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 RNA5SP382-201ENST00000363355 112 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
SEC61A1P61619 LCN1P2-201ENST00000372030 223 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 MT-RNR1-201ENST00000389680 954 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AHCYP8-201ENST00000425108 209 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AL590128.1-201ENST00000433407 286 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AC245452.2-201ENST00000435222 392 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 BX679664.2-201ENST00000439282 283 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AC234771.4-201ENST00000441416 730 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 WDR82P2-201ENST00000444540 928 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 NPM1P9-201ENST00000453156 844 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AP000547.1-201ENST00000454360 617 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 SEPT7P6-201ENST00000469999 1143 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 RN7SL216P-201ENST00000471607 298 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.7□□□□□ -1.5
SEC61A1P61619 RN7SL654P-201ENST00000479178 292 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC004232.1-201ENST00000571388 208 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AL078623.1-201ENST00000602702 907 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
SEC61A1P61619 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC105749.1-201ENST00000631338 2008 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 MARK2P4-201ENST00000503381 2380 ntBASIC5.7□□□□□ -1.5
SEC61A1P61619 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A1P61619 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A1P61619 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 Z97989.1-201ENST00000531702 2421 ntBASIC5.69□□□□□ -1.5
SEC61A1P61619 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 AC007012.2-201ENST00000623206 1676 ntBASIC5.69□□□□□ -1.5
SEC61A1P61619 AL451064.2-201ENST00000623514 1654 ntBASIC5.69□□□□□ -1.5
SEC61A1P61619 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 AC092701.1-201ENST00000623627 1551 ntBASIC5.69□□□□□ -1.5
SEC61A1P61619 RBPJP6-201ENST00000411556 1431 ntBASIC5.69□□□□□ -1.5
SEC61A1P61619 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SEC61A1P61619 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A1P61619 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms