Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN20P56880 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN20P56880 AC009135.2-201ENST00000624136 1768 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN20P56880 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 AC022613.3-201ENST00000560740 1346 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 RNF19BPY-201ENST00000458209 1550 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN20P56880 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN20P56880 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN20P56880 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN20P56880 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN20P56880 RN7SKP237-201ENST00000364663 301 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN20P56880 RNA5SP115-201ENST00000411160 107 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AC116036.1-201ENST00000412199 367 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AL359092.1-201ENST00000417156 265 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AL645939.3-201ENST00000435408 225 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN20P56880 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN20P56880 AC245291.3-201ENST00000443400 292 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN20P56880 PPP1R11P1-201ENST00000486095 376 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 RPL5P14-201ENST00000494197 878 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 RPL19P11-201ENST00000495944 589 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN20P56880 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN20P56880 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN20P56880 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 AL162632.2-201ENST00000553933 399 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AL049874.4-201ENST00000557593 255 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AC037479.1-201ENST00000558361 625 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN20P56880 AC133552.4-201ENST00000576103 676 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN20P56880 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 BX322635.1-201ENST00000605804 496 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AL162574.2-201ENST00000614618 657 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 AC104820.1-201ENST00000624183 307 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 AC011369.2-201ENST00000624423 1567 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN20P56880 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN20P56880 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 AC010168.2-201ENST00000562691 5428 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN20P56880 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
CLDN20P56880 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN20P56880 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN20P56880 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN20P56880 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN20P56880 LINC01616-201ENST00000561816 2280 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN20P56880 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN20P56880 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN20P56880 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN20P56880 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 MRPS6P2-201ENST00000381143 370 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN20P56880 VIM2P-201ENST00000402383 1294 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 RPL5P20-201ENST00000403848 896 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AL136116.2-201ENST00000404020 785 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AL133260.1-201ENST00000405720 405 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 RN7SKP221-201ENST00000410420 301 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 RANP7-201ENST00000418085 644 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CLDN20P56880 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 BX679664.2-201ENST00000439282 283 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC234771.2-201ENST00000445718 597 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AL020997.1-201ENST00000446554 349 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AL139156.3-201ENST00000454802 394 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms