Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH13P55290 AP001541.1-201ENST00000623322 1904 ntBASIC6.17□□□□□ -1.42
CDH13P55290 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH13P55290 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH13P55290 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.16□□□□□ -1.42
CDH13P55290 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 IMMTP1-201ENST00000435590 2219 ntBASIC6.16□□□□□ -1.42
CDH13P55290 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CDH13P55290 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 MIR433-201ENST00000384837 93 ntBASIC6.16□□□□□ -1.42
CDH13P55290 RNU11-6P-201ENST00000391127 133 ntBASIC6.16□□□□□ -1.42
CDH13P55290 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CDH13P55290 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 OR52N3P-201ENST00000413417 934 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 EIF3LP2-201ENST00000457262 807 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 SLC25A51P1-201ENST00000468432 871 ntBASIC6.16□□□□□ -1.42
CDH13P55290 RN7SL104P-201ENST00000498686 293 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 MORF4L2P1-201ENST00000503761 858 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AC018645.1-201ENST00000505003 109 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.16□□□□□ -1.42
CDH13P55290 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH13P55290 RNU6-751P-201ENST00000516382 101 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.16□□□□□ -1.42
CDH13P55290 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 AC110056.1-201ENST00000525759 911 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AL133399.1-201ENST00000527476 298 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH13P55290 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.16□□□□□ -1.42
CDH13P55290 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH13P55290 Z95114.1-201ENST00000624264 14574 ntBASIC6.16□□□□□ -1.42
CDH13P55290 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CDH13P55290 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 MAPK10-261ENST00000641050 3109 ntBASIC6.16□□□□□ -1.42
CDH13P55290 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CDH13P55290 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.16□□□□□ -1.42
CDH13P55290 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH13P55290 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH13P55290 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH13P55290 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
CDH13P55290 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CDH13P55290 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH13P55290 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
CDH13P55290 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH13P55290 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
CDH13P55290 AL121768.1-201ENST00000613917 2544 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AC010894.1-201ENST00000313760 361 ntBASIC6.15□□□□□ -1.42
CDH13P55290 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CDH13P55290 RNU1-84P-201ENST00000365447 164 ntBASIC6.15□□□□□ -1.42
CDH13P55290 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH13P55290 RN7SKP221-201ENST00000410420 301 ntBASIC6.15□□□□□ -1.42
CDH13P55290 HMGA1P8-201ENST00000414130 321 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AL139184.1-202ENST00000422303 222 ntBASIC6.15□□□□□ -1.42
CDH13P55290 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH13P55290 RPL34P27-201ENST00000428810 349 ntBASIC6.15□□□□□ -1.42
CDH13P55290 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH13P55290 HMGN1P32-201ENST00000441744 256 ntBASIC6.15□□□□□ -1.42
CDH13P55290 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH13P55290 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH13P55290 OR2A3P-201ENST00000493774 953 ntBASIC6.15□□□□□ -1.42
CDH13P55290 RNU6-1334P-201ENST00000516032 105 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH13P55290 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH13P55290 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH13P55290 AP003080.1-202ENST00000526526 915 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AP004607.5-201ENST00000532034 217 ntBASIC6.15□□□□□ -1.42
CDH13P55290 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH13P55290 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CDH13P55290 EIF1AXP2-201ENST00000555940 413 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AC007494.1-201ENST00000562293 760 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms