Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 LINC01616-201ENST00000561816 2280 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.62□□□□□ -1.35
PTPN9P43378 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 RNA5SP485-201ENST00000365053 119 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.62□□□□□ -1.35
PTPN9P43378 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.62□□□□□ -1.35
PTPN9P43378 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.62□□□□□ -1.35
PTPN9P43378 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.62□□□□□ -1.35
PTPN9P43378 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.62□□□□□ -1.35
PTPN9P43378 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.62□□□□□ -1.35
PTPN9P43378 AC245291.3-201ENST00000443400 292 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 OR2L9P-201ENST00000444456 913 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AC092601.1-201ENST00000444526 383 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 COX4I1P2-201ENST00000447446 547 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AC073476.1-201ENST00000452854 407 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AC099670.1-201ENST00000455141 783 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AC007386.1-201ENST00000455212 582 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.62□□□□□ -1.35
PTPN9P43378 RN7SL165P-201ENST00000477476 291 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 AC010343.2-201ENST00000510162 224 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AC234775.3-201ENST00000564612 656 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.62□□□□□ -1.35
PTPN9P43378 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.62□□□□□ -1.35
PTPN9P43378 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.62□□□□□ -1.35
PTPN9P43378 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 MIR7159-201ENST00000620587 66 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 GUCY1B2-204ENST00000531898 1979 ntBASIC6.62□□□□□ -1.35
PTPN9P43378 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTPN9P43378 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.62□□□□□ -1.35
PTPN9P43378 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PTPN9P43378 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.61□□□□□ -1.35
PTPN9P43378 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.61□□□□□ -1.35
PTPN9P43378 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC003045.1-201ENST00000398779 713 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 RNA5SP115-201ENST00000411160 107 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.61□□□□□ -1.35
PTPN9P43378 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.61□□□□□ -1.35
PTPN9P43378 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 Z82198.3-201ENST00000421145 199 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AC007568.1-201ENST00000422912 471 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.61□□□□□ -1.35
PTPN9P43378 BTBD7P2-201ENST00000441962 620 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 OR13K1P-201ENST00000444577 975 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC004890.1-201ENST00000461005 181 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 RN7SL39P-201ENST00000462264 297 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 RN7SL369P-201ENST00000477138 299 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 RPL12P31-201ENST00000478433 450 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 GM2AP2-201ENST00000491764 562 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTPN9P43378 AP001960.1-201ENST00000506494 658 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 SNORA74.1-201ENST00000516320 180 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 SNORD116-30-201ENST00000516468 85 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 CYCSP25-201ENST00000525280 316 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.61□□□□□ -1.35
PTPN9P43378 AC063977.7-201ENST00000594454 337 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AC245128.3-201ENST00000594721 748 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 AL589863.1-201ENST00000595383 631 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 BNIP3P7-201ENST00000605641 516 ntBASIC6.61□□□□□ -1.35
PTPN9P43378 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms