Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.81□□□□□ -1.32
SSR1P43307 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.81□□□□□ -1.32
SSR1P43307 RN7SKP196-201ENST00000516267 345 ntBASIC6.81□□□□□ -1.32
SSR1P43307 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.81□□□□□ -1.32
SSR1P43307 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.81□□□□□ -1.32
SSR1P43307 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 AC090774.2-201ENST00000584708 322 ntBASIC6.81□□□□□ -1.32
SSR1P43307 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 AC006363.1-201ENST00000603806 463 ntBASIC6.81□□□□□ -1.32
SSR1P43307 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.81□□□□□ -1.32
SSR1P43307 MIR7854-201ENST00000620068 65 ntBASIC6.81□□□□□ -1.32
SSR1P43307 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSR1P43307 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.81□□□□□ -1.32
SSR1P43307 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.81□□□□□ -1.32
SSR1P43307 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SSR1P43307 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.8□□□□□ -1.32
SSR1P43307 NEK2P2-201ENST00000438441 1338 ntBASIC6.8□□□□□ -1.32
SSR1P43307 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SSR1P43307 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SSR1P43307 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SSR1P43307 RNA5SP350-201ENST00000363298 111 ntBASIC6.8□□□□□ -1.32
SSR1P43307 RNA5SP140-201ENST00000364524 92 ntBASIC6.8□□□□□ -1.32
SSR1P43307 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 SNORA70H-201ENST00000383910 135 ntBASIC6.8□□□□□ -1.32
SSR1P43307 SNORA70J-201ENST00000384182 135 ntBASIC6.8□□□□□ -1.32
SSR1P43307 EI24P3-201ENST00000399046 1062 ntBASIC6.8□□□□□ -1.32
SSR1P43307 RPL5P20-201ENST00000403848 896 ntBASIC6.8□□□□□ -1.32
SSR1P43307 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.8□□□□□ -1.32
SSR1P43307 RBPJP6-201ENST00000411556 1431 ntBASIC6.8□□□□□ -1.32
SSR1P43307 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.8□□□□□ -1.32
SSR1P43307 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.8□□□□□ -1.32
SSR1P43307 AC097721.1-201ENST00000427150 1253 ntBASIC6.8□□□□□ -1.32
SSR1P43307 RPS19P6-201ENST00000441327 433 ntBASIC6.8□□□□□ -1.32
SSR1P43307 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 UBBP5-201ENST00000446970 266 ntBASIC6.8□□□□□ -1.32
SSR1P43307 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.8□□□□□ -1.32
SSR1P43307 NPM1P28-201ENST00000492269 840 ntBASIC6.8□□□□□ -1.32
SSR1P43307 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.8□□□□□ -1.32
SSR1P43307 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.8□□□□□ -1.32
SSR1P43307 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.8□□□□□ -1.32
SSR1P43307 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.8□□□□□ -1.32
SSR1P43307 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.8□□□□□ -1.32
SSR1P43307 AL512430.4-201ENST00000603085 613 ntBASIC6.8□□□□□ -1.32
SSR1P43307 AC116165.3-201ENST00000614524 400 ntBASIC6.8□□□□□ -1.32
SSR1P43307 TCL6_3.1-201ENST00000619064 137 ntBASIC6.8□□□□□ -1.32
SSR1P43307 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.8□□□□□ -1.32
SSR1P43307 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
SSR1P43307 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SSR1P43307 AC105235.1-201ENST00000623208 1816 ntBASIC6.8□□□□□ -1.32
SSR1P43307 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSR1P43307 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.79□□□□□ -1.32
SSR1P43307 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
SSR1P43307 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSR1P43307 PPIAP24-201ENST00000328558 471 ntBASIC6.79□□□□□ -1.32
SSR1P43307 MIR133A2-201ENST00000347538 102 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.79□□□□□ -1.32
SSR1P43307 AC074375.1-201ENST00000372993 192 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC245036.1-201ENST00000391727 309 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC009506.2-201ENST00000420635 840 ntBASIC6.79□□□□□ -1.32
SSR1P43307 PTPN2P1-201ENST00000423212 1072 ntBASIC6.79□□□□□ -1.32
SSR1P43307 BX119904.3-201ENST00000428194 957 ntBASIC6.79□□□□□ -1.32
SSR1P43307 VN1R53P-201ENST00000429536 957 ntBASIC6.79□□□□□ -1.32
SSR1P43307 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.79□□□□□ -1.32
SSR1P43307 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.79□□□□□ -1.32
SSR1P43307 RPL36AP55-201ENST00000454114 305 ntBASIC6.79□□□□□ -1.32
SSR1P43307 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.79□□□□□ -1.32
SSR1P43307 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.79□□□□□ -1.32
SSR1P43307 AP005639.1-201ENST00000526939 192 ntBASIC6.79□□□□□ -1.32
SSR1P43307 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.79□□□□□ -1.32
SSR1P43307 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms