Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RPL17P2-201ENST00000491913 451 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 NPM1P27-201ENST00000502784 830 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC021146.11-201ENST00000503319 491 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC083906.1-201ENST00000509298 406 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 RNA5SP473-201ENST00000516402 125 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC104997.1-201ENST00000519761 717 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 MIR5682-201ENST00000584864 76 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC011921.2-201ENST00000589465 152 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC011447.2-201ENST00000592921 283 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN3P20807 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN3P20807 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 AC012629.3-201ENST00000623397 328 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 CLUHP10-201ENST00000631979 980 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 AC119674.1-220ENST00000641502 1048 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN3P20807 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN3P20807 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 HSPD1P7-201ENST00000447985 1686 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN3P20807 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN3P20807 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN3P20807 AC009779.8-201ENST00000641684 4384 ntBASIC6.39□□□□□ -1.39
CAPN3P20807 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CAPN3P20807 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CAPN3P20807 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN3P20807 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN3P20807 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN3P20807 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 RNU1-55P-201ENST00000365510 158 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AL391419.1-201ENST00000398901 1275 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 ST13P16-201ENST00000401760 781 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AL136116.2-201ENST00000404020 785 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 AL512504.1-201ENST00000415494 778 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AL663061.1-201ENST00000416625 580 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 RPL3P11-201ENST00000434028 1146 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 RPL23AP28-201ENST00000448062 470 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN3P20807 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN3P20807 AL135933.1-201ENST00000498657 802 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CAPN3P20807 RNU6-362P-201ENST00000516736 90 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN3P20807 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC018558.5-201ENST00000565840 952 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AC106785.4-201ENST00000569492 412 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 LINC00556-201ENST00000569603 412 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 WBP1LP11-201ENST00000586141 328 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC011500.1-201ENST00000601963 469 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN3P20807 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC122710.3-201ENST00000606566 541 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 OR51C1P-201ENST00000608504 942 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AL356608.1-201ENST00000610034 820 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 AL133370.2-201ENST00000619934 439 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN3P20807 AC140479.4-205ENST00000636339 820 ntBASIC6.38□□□□□ -1.39
CAPN3P20807 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms