Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC009237.12-201ENST00000604755 742 ntBASIC7.12□□□□□ -1.27
HOXC6P09630 MIR6793-201ENST00000612376 63 ntBASIC7.12□□□□□ -1.27
HOXC6P09630 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.12□□□□□ -1.27
HOXC6P09630 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HOXC6P09630 AL136531.3-201ENST00000624378 3658 ntBASIC7.12□□□□□ -1.27
HOXC6P09630 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXC6P09630 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXC6P09630 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXC6P09630 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXC6P09630 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXC6P09630 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXC6P09630 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXC6P09630 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
HOXC6P09630 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXC6P09630 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXC6P09630 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 RARSP1-201ENST00000542842 1418 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXC6P09630 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXC6P09630 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
HOXC6P09630 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HOXC6P09630 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 RNU1-49P-201ENST00000363468 159 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 RNU1-24P-201ENST00000364285 165 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 EEF1B2P8-201ENST00000414101 671 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 HMGN1P36-201ENST00000446623 298 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC023141.9-201ENST00000458734 412 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 AC074386.1-201ENST00000476560 767 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 RN7SL193P-201ENST00000491708 276 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 RPS4XP14-201ENST00000493072 781 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXC6P09630 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC027544.3-201ENST00000535082 757 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXC6P09630 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.11□□□□□ -1.27
HOXC6P09630 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXC6P09630 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC022467.1-201ENST00000614738 749 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 MIR7159-201ENST00000620587 66 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXC6P09630 AC092821.2-201ENST00000545710 2042 ntBASIC7.11□□□□□ -1.27
HOXC6P09630 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXC6P09630 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXC6P09630 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXC6P09630 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXC6P09630 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXC6P09630 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 RBMY1HP-201ENST00000382759 1389 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HOXC6P09630 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 RNU1-150P-201ENST00000362491 162 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXC6P09630 AL096711.1-201ENST00000404780 554 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 BMS1P13-201ENST00000417301 885 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 BX284632.2-201ENST00000421091 399 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AL121578.1-201ENST00000428051 892 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXC6P09630 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.1□□□□□ -1.27
HOXC6P09630 SEPT14P12-201ENST00000442280 560 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 BMS1P10-201ENST00000443754 1120 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 RN7SL717P-201ENST00000478343 297 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXC6P09630 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXC6P09630 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXC6P09630 IGLV3-6-201ENST00000523937 250 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AP000648.1-201ENST00000529682 397 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HOXC6P09630 AP000662.1-201ENST00000530952 487 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.1□□□□□ -1.27
HOXC6P09630 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 MIR3176-201ENST00000582210 90 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 NPM1P45-201ENST00000583151 559 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AL953862.2-201ENST00000603089 820 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AL031601.1-201ENST00000605702 394 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 AL513218.1-201ENST00000606527 391 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms