Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.45□□□□□ -1.22
COL1A1P02452 AC051619.2-201ENST00000559063 397 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.45□□□□□ -1.22
COL1A1P02452 MIR6793-201ENST00000612376 63 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 MIR6826-201ENST00000617808 98 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 AL357562.1-201ENST00000624911 609 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 AC123769.1-201ENST00000530992 3192 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL1A1P02452 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL1A1P02452 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.45□□□□□ -1.22
COL1A1P02452 CR788268.1-201ENST00000603931 1809 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 AF287957.1-201ENST00000607368 1595 ntBASIC7.45□□□□□ -1.22
COL1A1P02452 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.45□□□□□ -1.22
COL1A1P02452 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
COL1A1P02452 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 MIR143-201ENST00000385300 106 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
COL1A1P02452 BX284632.2-201ENST00000421091 399 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.44□□□□□ -1.22
COL1A1P02452 AL512605.1-202ENST00000441919 381 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 AL359955.2-201ENST00000445380 353 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.44□□□□□ -1.22
COL1A1P02452 AC010343.2-201ENST00000510162 224 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.44□□□□□ -1.22
COL1A1P02452 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.44□□□□□ -1.22
COL1A1P02452 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.44□□□□□ -1.22
COL1A1P02452 AC007225.2-201ENST00000562529 256 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 MIR3176-201ENST00000582210 90 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.44□□□□□ -1.22
COL1A1P02452 AC022726.2-201ENST00000634673 547 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 AL591848.4-201ENST00000567832 3472 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 AC011815.2-201ENST00000618230 2021 ntBASIC7.44□□□□□ -1.22
COL1A1P02452 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
COL1A1P02452 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.44□□□□□ -1.22
COL1A1P02452 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.44□□□□□ -1.22
COL1A1P02452 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
COL1A1P02452 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.44□□□□□ -1.22
COL1A1P02452 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.44□□□□□ -1.22
COL1A1P02452 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL1A1P02452 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
COL1A1P02452 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL1A1P02452 MIR433-201ENST00000384837 93 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 MIR1203-201ENST00000408812 85 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.43□□□□□ -1.22
COL1A1P02452 AC245096.1-201ENST00000413104 546 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 FABP5P2-201ENST00000439042 408 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.43□□□□□ -1.22
COL1A1P02452 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.43□□□□□ -1.22
COL1A1P02452 RPL7L1P4-201ENST00000513004 707 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 RN7SKP98-201ENST00000517070 156 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 AP000648.1-201ENST00000529682 397 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 RPL12P48-201ENST00000605620 304 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 AL031601.1-201ENST00000605702 394 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 AC096708.4-201ENST00000620563 552 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL1A1P02452 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL1A1P02452 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
COL1A1P02452 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.43□□□□□ -1.22
COL1A1P02452 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.43□□□□□ -1.22
COL1A1P02452 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.43□□□□□ -1.22
COL1A1P02452 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.43□□□□□ -1.22
COL1A1P02452 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.43□□□□□ -1.22
COL1A1P02452 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.43□□□□□ -1.22
COL1A1P02452 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL1A1P02452 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL1A1P02452 RPL35AP3-201ENST00000414680 288 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.43□□□□□ -1.22
COL1A1P02452 MARK2P12-201ENST00000420129 585 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 BX323845.3-201ENST00000428215 527 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 AL451136.1-201ENST00000435399 325 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 DNAJC19P5-201ENST00000443295 316 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.43□□□□□ -1.22
COL1A1P02452 AC092865.4-201ENST00000477936 615 ntBASIC7.43□□□□□ -1.22
COL1A1P02452 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms