Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 CYP4F30P-202ENST00000420048 405 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC007365.2-201ENST00000428806 458 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 ARL4AP4-201ENST00000434170 518 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AL354872.1-201ENST00000456361 967 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 RPL23AP80-201ENST00000495605 424 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC091965.3-201ENST00000506236 208 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC093325.1-201ENST00000508378 326 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC026782.2-201ENST00000510845 636 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC130366.1-201ENST00000526505 1192 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AP005901.4-201ENST00000577336 569 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC115989.2-201ENST00000578640 563 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.98□□□□□ -1.45
CLPTM1O96005 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.98□□□□□ -1.45
CLPTM1O96005 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 PTCHD3P1-201ENST00000612350 537 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 AC005355.2-201ENST00000625064 484 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.98□□□□□ -1.45
CLPTM1O96005 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLPTM1O96005 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.98□□□□□ -1.45
CLPTM1O96005 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CLPTM1O96005 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.97□□□□□ -1.45
CLPTM1O96005 AC138907.8-201ENST00000623981 2256 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.97□□□□□ -1.45
CLPTM1O96005 TRIM53CP-201ENST00000531490 1354 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AP005435.3-201ENST00000531260 3198 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.97□□□□□ -1.45
CLPTM1O96005 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLPTM1O96005 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CLPTM1O96005 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLPTM1O96005 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.97□□□□□ -1.45
CLPTM1O96005 VTI1BP4-201ENST00000427516 527 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 PUDPP2-201ENST00000431423 643 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AL157385.1-201ENST00000446973 268 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 AC236972.4-201ENST00000458091 963 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AL079303.1-201ENST00000486611 463 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AC122714.1-201ENST00000502510 459 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.97□□□□□ -1.45
CLPTM1O96005 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.97□□□□□ -1.45
CLPTM1O96005 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.97□□□□□ -1.45
CLPTM1O96005 AL121579.2-201ENST00000555466 590 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.97□□□□□ -1.45
CLPTM1O96005 AL132640.1-201ENST00000559594 619 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 RN7SL270P-201ENST00000579643 281 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AC100832.2-201ENST00000582080 776 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.97□□□□□ -1.45
CLPTM1O96005 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.97□□□□□ -1.45
CLPTM1O96005 BUB1P1-201ENST00000603541 607 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.97□□□□□ -1.45
CLPTM1O96005 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.97□□□□□ -1.45
CLPTM1O96005 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 OR5M2P-202ENST00000641241 4242 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 AC022325.1-201ENST00000502748 2199 ntBASIC5.97□□□□□ -1.45
CLPTM1O96005 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLPTM1O96005 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.97□□□□□ -1.45
CLPTM1O96005 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLPTM1O96005 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
CLPTM1O96005 AC114876.1-201ENST00000490962 1366 ntBASIC5.96□□□□□ -1.45
CLPTM1O96005 PPBPP2-201ENST00000513150 1362 ntBASIC5.96□□□□□ -1.45
CLPTM1O96005 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.96□□□□□ -1.46
CLPTM1O96005 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLPTM1O96005 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLPTM1O96005 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLPTM1O96005 RNA5SP176-201ENST00000390956 110 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AL161722.1-201ENST00000446972 1032 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.96□□□□□ -1.46
CLPTM1O96005 AC009244.1-201ENST00000450566 258 ntBASIC5.96□□□□□ -1.46
CLPTM1O96005 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.96□□□□□ -1.46
CLPTM1O96005 RN7SL143P-201ENST00000496780 297 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms