Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC023271.1-201ENST00000445936 1090 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 RPL7AP71-201ENST00000451120 739 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 RSU1P1-201ENST00000453416 441 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 OR7E7P-201ENST00000455678 1012 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 RARRES2P3-201ENST00000457739 473 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 AL928654.1-201ENST00000476081 354 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 RN7SL37P-201ENST00000490461 307 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 AL390198.2-201ENST00000510553 222 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.22□□□□□ -1.41
SHOX2O60902 AP001994.1-201ENST00000527539 826 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 AP001646.2-201ENST00000528645 1156 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 HNRNPCP8-201ENST00000528764 888 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.22□□□□□ -1.41
SHOX2O60902 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.22□□□□□ -1.41
SHOX2O60902 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 AC023080.1-201ENST00000551663 931 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
SHOX2O60902 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 ANP32BP1-202ENST00000568553 737 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.22□□□□□ -1.41
SHOX2O60902 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 AC006115.2-201ENST00000596823 202 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 AL355974.3-201ENST00000617383 467 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SHOX2O60902 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.22□□□□□ -1.41
SHOX2O60902 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHOX2O60902 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHOX2O60902 MAPK10-328ENST00000641553 4009 ntBASIC6.22□□□□□ -1.41
SHOX2O60902 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SHOX2O60902 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
SHOX2O60902 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SHOX2O60902 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.21□□□□□ -1.41
SHOX2O60902 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHOX2O60902 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SHOX2O60902 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.21□□□□□ -1.42
SHOX2O60902 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SHOX2O60902 RNA5SP280-201ENST00000411230 115 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC073476.1-201ENST00000452854 407 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.21□□□□□ -1.42
SHOX2O60902 RN7SL197P-201ENST00000466981 299 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AC099340.1-201ENST00000475247 599 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 OR9A1P-202ENST00000484361 945 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 EIF4E2P2-201ENST00000492033 736 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.21□□□□□ -1.42
SHOX2O60902 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.21□□□□□ -1.42
SHOX2O60902 GLUD1P3-202ENST00000508551 200 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.21□□□□□ -1.42
SHOX2O60902 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.21□□□□□ -1.42
SHOX2O60902 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.21□□□□□ -1.42
SHOX2O60902 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC024614.1-201ENST00000577546 307 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 RN7SL208P-201ENST00000577964 296 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.21□□□□□ -1.42
SHOX2O60902 AC092960.1-201ENST00000604762 351 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AC012510.1-201ENST00000607946 759 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 AC093635.1-201ENST00000609028 555 ntBASIC6.21□□□□□ -1.42
SHOX2O60902 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.21□□□□□ -1.42
SHOX2O60902 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
SHOX2O60902 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SHOX2O60902 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHOX2O60902 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.21□□□□□ -1.42
SHOX2O60902 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.21□□□□□ -1.42
SHOX2O60902 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 PARP4P2-201ENST00000446672 3326 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms