Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NPM1P28-201ENST00000492269 840 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 RNA5SP116-201ENST00000516132 98 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 OR8K2P-201ENST00000524645 927 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 AC140063.1-201ENST00000541343 259 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TRIM38O00635 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
TRIM38O00635 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM38O00635 OOSP1P2-201ENST00000579644 351 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 AL590032.1-201ENST00000604920 252 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AL035410.2-201ENST00000604963 864 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 RPL21P136-201ENST00000605378 396 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC008147.4-201ENST00000617570 1204 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 OR1N1-202ENST00000619659 939 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC119674.1-220ENST00000641502 1048 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC090220.1-201ENST00000593078 1699 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM38O00635 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM38O00635 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC010168.2-201ENST00000562691 5428 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM38O00635 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 PPIAP26-201ENST00000377951 522 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 UBBP1-201ENST00000392399 473 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 VIM2P-201ENST00000402383 1294 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AL358178.1-201ENST00000407698 397 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 AC013470.3-201ENST00000420252 1194 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AL139158.1-201ENST00000424719 340 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ARMC4P1-201ENST00000438905 707 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 RPL5P10-201ENST00000445207 894 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AC007383.1-201ENST00000445875 636 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 MORF4L1P4-201ENST00000450245 976 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM38O00635 CTSLP6-201ENST00000458273 1002 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM38O00635 SNX18P23-201ENST00000510867 677 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 SETP12-201ENST00000514068 805 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AC011352.2-201ENST00000514574 1016 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 RNU6-760P-201ENST00000516078 97 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM38O00635 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM38O00635 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 AC012175.1-201ENST00000603755 531 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.66□□□□□ -1.34
TRIM38O00635 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ZNF806-201ENST00000438300 1774 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 TNPO1P2-201ENST00000426249 2665 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM38O00635 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM38O00635 API5P1-201ENST00000424316 1510 ntBASIC6.66□□□□□ -1.34
TRIM38O00635 AL139384.2-201ENST00000613809 3590 ntBASIC6.65□□□□□ -1.34
TRIM38O00635 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM38O00635 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms