Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXN3O00409 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
FOXN3O00409 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXN3O00409 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXN3O00409 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC024341.1-201ENST00000526444 1552 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.92□□□□□ -1.3
FOXN3O00409 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 ZNF658B-201ENST00000602828 3408 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC010894.1-201ENST00000313760 361 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
FOXN3O00409 RNA5SP350-201ENST00000363298 111 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
FOXN3O00409 RNA5SP155-201ENST00000411154 129 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC098592.2-201ENST00000413158 265 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 AL589794.1-201ENST00000424971 390 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 AL355355.1-201ENST00000442900 793 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AL020997.1-201ENST00000446554 349 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.92□□□□□ -1.3
FOXN3O00409 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 MTND2P39-201ENST00000457230 764 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC063955.1-201ENST00000462872 685 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 RN7SL83P-201ENST00000468131 297 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 RN7SL790P-201ENST00000474043 298 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 RPL5P33-201ENST00000487833 905 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.92□□□□□ -1.3
FOXN3O00409 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC093870.1-201ENST00000506837 213 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 MINOS1P4-201ENST00000515470 318 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 OR7E10P-201ENST00000526420 991 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.92□□□□□ -1.3
FOXN3O00409 CHEK2P2-201ENST00000554701 672 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.92□□□□□ -1.3
FOXN3O00409 HMGN2P47-201ENST00000559378 272 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC068408.1-201ENST00000577406 1144 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 AC090616.1-201ENST00000583895 447 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 FO681491.1-202ENST00000623392 737 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 AL596275.2-208ENST00000641192 594 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC119674.1-220ENST00000641502 1048 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 AC114876.1-201ENST00000490962 1366 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 AC011504.1-201ENST00000623331 4103 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 ICE2P1-201ENST00000512800 1849 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.92□□□□□ -1.3
FOXN3O00409 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
FOXN3O00409 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXN3O00409 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXN3O00409 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC011815.2-201ENST00000618230 2021 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXN3O00409 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
FOXN3O00409 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXN3O00409 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms