Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NPM1P37-201ENST00000403105 874 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 MORF4L1P7-201ENST00000426038 703 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 NPM1P26-201ENST00000426339 738 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 LSM3P3-201ENST00000436601 306 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC019185.3-201ENST00000438805 323 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 RRM2P4-201ENST00000441721 562 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 RNU7-157P-201ENST00000459600 66 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 RPL34P34-201ENST00000465389 354 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 SCARNA6-201ENST00000515982 265 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC103833.1-201ENST00000517442 172 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC139697.1-201ENST00000548429 745 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AL031846.1-201ENST00000560933 314 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 RPS27AP19-201ENST00000597285 458 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC004801.6-201ENST00000616571 978 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC087893.2-201ENST00000623272 255 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC079298.2-201ENST00000623885 459 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 FGL2-202ENST00000637771 989 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC011471.4-201ENST00000638271 216 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC079949.2-201ENST00000617117 2933 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 AC100810.3-201ENST00000633189 2240 ntBASIC7.32□□□□□ -1.24
CCDC66A2RUB6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC66A2RUB6 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 STAG3L4-201ENST00000352103 530 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 VN1R51P-201ENST00000411675 945 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 RPSAP1-201ENST00000421328 880 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC093107.1-201ENST00000422772 609 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ETF1P1-206ENST00000427296 984 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 RPL21P33-201ENST00000444831 484 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AP002345.1-201ENST00000456493 928 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 PRELID3BP6-201ENST00000503839 571 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC016559.1-201ENST00000511420 199 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AP003355.1-201ENST00000518956 587 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC104115.2-201ENST00000523026 687 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 SOX5P1-201ENST00000524155 1127 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC092375.1-201ENST00000550410 637 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 MIR6731-201ENST00000614863 72 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC66A2RUB6 AC120057.5-201ENST00000623840 154 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 SNX18P10-201ENST00000625014 519 ntBASIC7.31□□□□□ -1.24
CCDC66A2RUB6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms