Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC010132.4-201ENST00000569883 1368 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 RNU1-55P-201ENST00000365510 158 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AL590635.1-201ENST00000406314 586 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 Z86062.1-201ENST00000406773 777 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 RNA5SP155-201ENST00000411154 129 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC096537.2-201ENST00000413707 714 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 GTF3AP1-201ENST00000416942 1004 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 NENFP1-201ENST00000419476 466 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AL596268.1-201ENST00000427910 1048 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC245452.2-201ENST00000435222 392 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 ELOCP3-201ENST00000439303 348 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 SCAND3P1-201ENST00000439854 1060 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 RPL12P49-201ENST00000441100 121 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC019084.1-201ENST00000457337 432 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC098583.1-201ENST00000480875 255 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC004232.1-201ENST00000571388 208 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 MIR5095-201ENST00000578844 88 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC120053.1-201ENST00000607706 736 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC005514.1-201ENST00000623521 208 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 AC061999.1-201ENST00000624454 177 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 FANCD2P2-201ENST00000437591 1400 ntBASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.5□□□□□ -1.21
COL4A3BPQ9Y5P4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 RACGAP1P-201ENST00000550663 1879 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL117339.4-201ENST00000608335 7063 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 RNA5SP308-201ENST00000362532 115 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL672167.2-201ENST00000377164 879 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 PTGES3P2-201ENST00000407942 482 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 PFN1P11-201ENST00000445829 389 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC009963.4-201ENST00000448535 339 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 KF459542.1-201ENST00000450908 553 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC078857.1-201ENST00000469870 667 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC099340.1-201ENST00000475247 599 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 RN7SL836P-201ENST00000476140 296 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC108729.2-201ENST00000476543 840 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 OSBPL9P3-201ENST00000534523 595 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC004775.1-201ENST00000607389 753 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL596244.1-201ENST00000567068 3779 ntBASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.49□□□□□ -1.21
COL4A3BPQ9Y5P4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms