Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 PTMAP8-201ENST00000397729 342 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 NUS1P4-201ENST00000401550 585 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 MIR548F1-201ENST00000408667 84 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 RNU2-65P-201ENST00000410162 185 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AL359633.1-201ENST00000421403 310 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC241520.1-201ENST00000422654 1099 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 RPL6P30-201ENST00000443382 862 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC034244.1-201ENST00000507687 207 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC106872.4-201ENST00000510050 523 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 OR5H4P-201ENST00000510851 923 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC113352.1-201ENST00000513196 666 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC090115.2-201ENST00000548060 883 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC233699.1-201ENST00000569955 1168 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 MIR4437-201ENST00000581331 60 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 MIR3611-201ENST00000584484 83 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC079089.3-201ENST00000603094 673 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AL390058.1-201ENST00000603834 629 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC108451.2-201ENST00000603875 538 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AL136139.1-201ENST00000605568 222 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC100793.4-201ENST00000613683 429 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC026368.1-201ENST00000614934 690 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 CGA-206ENST00000630630 832 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 FLJ42393-201ENST00000623801 2270 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC087045.3-201ENST00000623046 2468 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC092447.7-201ENST00000422212 1621 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC067942.1-201ENST00000488045 1493 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 RNU6-907P-201ENST00000390924 102 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 USP9YP6-201ENST00000413550 854 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL109913.1-201ENST00000421173 514 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 GAPDHP69-201ENST00000425504 1008 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 ELOCP3-201ENST00000439303 348 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 TRAPPC2P8-201ENST00000440676 396 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL137074.1-201ENST00000442640 465 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 SUMO2P1-206ENST00000445436 284 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC104763.1-201ENST00000475274 360 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 NPM1P17-201ENST00000479221 602 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 FTH1P23-201ENST00000492727 550 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC008427.1-201ENST00000503102 655 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 SCARNA20.1-201ENST00000516009 138 ntBASIC9.56□□□□□ -0.88
PDZRN3Q9UPQ7 AC113191.1-201ENST00000517759 403 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms