Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.62□□□□□ -1.35
CISHQ9NSE2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CISHQ9NSE2 AC011416.1-201ENST00000514947 1732 ntBASIC6.62□□□□□ -1.35
CISHQ9NSE2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 CCNT2P1-201ENST00000423082 1315 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 RPS17P17-201ENST00000419392 409 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC007562.1-201ENST00000421819 517 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 IGLV3-4-201ENST00000432300 244 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC023274.2-201ENST00000445264 521 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 TIMM8BP2-201ENST00000445940 251 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC090958.1-201ENST00000511122 351 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 RN7SKP183-201ENST00000517169 324 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC008555.7-201ENST00000605008 583 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 AL137067.2-201ENST00000621202 131 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC073488.6-201ENST00000632293 754 ntBASIC6.61□□□□□ -1.35
CISHQ9NSE2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.61□□□□□ -1.35
CISHQ9NSE2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CISHQ9NSE2 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC024587.1-201ENST00000505925 2157 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 AL359091.1-201ENST00000449048 1734 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 LCN1P2-201ENST00000372030 223 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 SNORA70H-201ENST00000383910 135 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 SNORA70J-201ENST00000384182 135 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 PSMD10P2-201ENST00000432890 672 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 AL354893.1-201ENST00000433735 348 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 CLNS1AP1-201ENST00000435954 682 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 OR3D1P-201ENST00000438288 955 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC010240.2-201ENST00000445363 1205 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 EEF1B2P3-201ENST00000447718 678 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AP002453.1-201ENST00000492327 668 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC108103.1-201ENST00000511286 446 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 OR6M2P-201ENST00000529831 871 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 RNU4ATAC-201ENST00000580972 127 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 MIR4701-201ENST00000583094 63 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AL359091.2-201ENST00000609303 556 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AL357140.4-201ENST00000636827 412 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CISHQ9NSE2 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CISHQ9NSE2 AC007114.2-201ENST00000576014 4281 ntBASIC6.6□□□□□ -1.35
CISHQ9NSE2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms