Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 CUL4AP1-201ENST00000514750 1863 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 RNU6-1215P-201ENST00000384441 102 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 MTCO1P56-201ENST00000401674 224 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 ERHP2-201ENST00000402323 299 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 RPL7P53-201ENST00000421245 739 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC246680.2-201ENST00000422106 389 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL121916.1-201ENST00000429405 308 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC244035.1-201ENST00000430042 390 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 OR6R1P-201ENST00000431838 940 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 FECHP1-201ENST00000431896 1214 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 PMS2P9-201ENST00000441237 515 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC063955.1-201ENST00000462872 685 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 RN7SL798P-201ENST00000468562 301 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC105918.1-201ENST00000474399 838 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 RPL7P40-201ENST00000481703 745 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 RPL23AP44-201ENST00000482216 473 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 SUMO1P1-201ENST00000497904 306 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC021087.2-201ENST00000504656 1203 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC092851.1-201ENST00000535964 478 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AP000619.2-201ENST00000546014 969 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC026111.1-201ENST00000551090 1195 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC021483.2-201ENST00000567415 758 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC015818.6-201ENST00000584274 634 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC008592.5-201ENST00000607856 547 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC017083.3-201ENST00000609955 700 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL158063.1-201ENST00000615349 536 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AL449283.1-201ENST00000602631 3403 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 Z93929.1-201ENST00000418200 1475 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 ZNF840P-201ENST00000504759 1996 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AC006116.1-201ENST00000587908 2171 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 OR10AB1P-202ENST00000641219 1686 ntBASIC7.22□□□□□ -1.25
SSU72Q9NP77 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SSU72Q9NP77 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SSU72Q9NP77 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.21□□□□□ -1.25
SSU72Q9NP77 AL139805.2-201ENST00000455305 2433 ntBASIC7.21□□□□□ -1.25
SSU72Q9NP77 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SSU72Q9NP77 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SSU72Q9NP77 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms