Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
NXF3Q9H4D5 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.77□□□□□ -1.32
NXF3Q9H4D5 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC022905.1-201ENST00000503430 3048 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC130360.1-201ENST00000425489 1117 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 OR3D1P-201ENST00000438288 955 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 FABP5P2-201ENST00000439042 408 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 PPIAP27-201ENST00000453800 265 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 VPS25P1-201ENST00000455691 508 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 RANP2-201ENST00000456833 229 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 SNX18P26-201ENST00000458433 740 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 RN7SKP238-201ENST00000516483 249 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 RN7SKP98-201ENST00000517070 156 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC130365.2-201ENST00000525882 1201 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC027369.2-201ENST00000528030 440 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC092865.1-201ENST00000544395 1023 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC079905.1-201ENST00000549280 475 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC068768.2-201ENST00000602352 343 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC006924.1-201ENST00000610750 559 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AL136097.3-201ENST00000611097 505 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 AC007998.4-201ENST00000612496 2533 ntBASIC6.77□□□□□ -1.33
NXF3Q9H4D5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
NXF3Q9H4D5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC105749.1-201ENST00000631338 2008 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 SNORA21-201ENST00000362423 132 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 RNA5SP478-201ENST00000364657 115 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LCN1P2-201ENST00000372030 223 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AL445238.1-204ENST00000400311 463 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 UBE2V1P14-201ENST00000415815 558 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC097721.1-201ENST00000427150 1253 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC002553.3-201ENST00000453002 341 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC098847.1-201ENST00000473094 348 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LSM3P4-201ENST00000502948 309 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC096754.1-201ENST00000508904 818 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 CR383658.1-201ENST00000514609 734 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 RNA5SP340-201ENST00000517132 107 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC027229.1-201ENST00000583887 253 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC067773.1-201ENST00000603284 1094 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AL365181.4-201ENST00000609800 547 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.76□□□□□ -1.33
NXF3Q9H4D5 BIN2P1-201ENST00000504996 1530 ntBASIC6.76□□□□□ -1.33
NXF3Q9H4D5 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms