Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 RNA5SP350-201ENST00000363298 111 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 RPL12P23-201ENST00000405880 490 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL451063.1-201ENST00000450164 1133 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 NPM1P27-201ENST00000502784 830 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 OR9G2P-201ENST00000533326 880 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AC011270.1-201ENST00000558606 583 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL390877.1-201ENST00000605704 214 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AC144521.1-201ENST00000607148 956 ntBASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.32□□□□□ -1.24
CDK5RAP3Q96JB5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 OR7A2P-201ENST00000304105 930 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 MRPS6P2-201ENST00000381143 370 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 RPL23AP85-201ENST00000421838 433 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC007064.3-201ENST00000422608 359 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 FANCD2P2-201ENST00000437591 1400 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 WDR82P2-201ENST00000444540 928 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 OR6C72P-201ENST00000451403 892 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AL034369.1-201ENST00000453808 477 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 RPS4XP17-201ENST00000479057 754 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 RN7SL502P-201ENST00000481857 290 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 DEFB109A-201ENST00000482450 265 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC074386.1-206ENST00000487102 761 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC093870.1-201ENST00000506837 213 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 RNA5SP116-201ENST00000516132 98 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC024341.1-201ENST00000526444 1552 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 HMGN1P26-201ENST00000558737 303 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC024267.2-201ENST00000582737 417 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC114477.1-201ENST00000605097 605 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC022001.1-201ENST00000605193 268 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC116165.3-201ENST00000614524 400 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 MIR6503-201ENST00000622884 86 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 AC074141.1-201ENST00000588129 2995 ntBASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.31□□□□□ -1.24
CDK5RAP3Q96JB5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP3Q96JB5 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms