Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AP003385.1-201ENST00000426387 893 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 AL590128.1-201ENST00000433407 286 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC234771.4-201ENST00000441416 730 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 RPL31P11-202ENST00000454082 372 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 RPSAP24-201ENST00000461543 873 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC092375.1-201ENST00000550410 637 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AP002884.5-201ENST00000595053 1132 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AL590032.1-201ENST00000604920 252 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AL159169.2-201ENST00000610061 1269 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC127071.2-201ENST00000623293 527 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 AP002370.1-201ENST00000528055 1602 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.34□□□□□ -1.39
VMP1Q96GC9 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 IMMTP1-201ENST00000435590 2219 ntBASIC6.34□□□□□ -1.39
VMP1Q96GC9 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
VMP1Q96GC9 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
VMP1Q96GC9 AC026523.2-201ENST00000625039 7739 ntBASIC6.34□□□□□ -1.4
VMP1Q96GC9 AL592429.1-201ENST00000403909 1473 ntBASIC6.34□□□□□ -1.4
VMP1Q96GC9 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.34□□□□□ -1.4
VMP1Q96GC9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
VMP1Q96GC9 ZNF806-201ENST00000438300 1774 ntBASIC6.34□□□□□ -1.4
VMP1Q96GC9 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 AL591848.4-201ENST00000567832 3472 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AP005139.1-201ENST00000580702 1647 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC006484.1-201ENST00000435086 1884 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC092634.1-201ENST00000366505 199 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 RNA5SP474-201ENST00000391234 90 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 NPM1P37-201ENST00000403105 874 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AL451046.1-201ENST00000406097 534 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RAB9AP4-201ENST00000415230 609 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 PAICSP2-201ENST00000429118 1150 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 BMP6P1-201ENST00000431230 679 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AL022324.2-201ENST00000434827 780 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 HMGN1P32-201ENST00000441744 256 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 RN7SL382P-201ENST00000482631 282 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 RPL5P33-201ENST00000487833 905 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RN7SL143P-201ENST00000496780 297 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 RN7SKP67-201ENST00000515905 235 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 NPM1P52-201ENST00000518264 846 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 SNRPCP6-201ENST00000528310 210 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AP001804.2-201ENST00000533932 910 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 SETP17-201ENST00000534163 817 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC027796.1-201ENST00000575593 512 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RN7SL199P-201ENST00000578752 281 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RN7SL656P-201ENST00000579044 281 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RN7SL404P-201ENST00000582421 281 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.33□□□□□ -1.4
VMP1Q96GC9 OR1N1-202ENST00000619659 939 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC005899.6-201ENST00000620729 297 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC099654.15-201ENST00000639802 509 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 TNPO1P2-201ENST00000426249 2665 ntBASIC6.33□□□□□ -1.4
VMP1Q96GC9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VMP1Q96GC9 AC020658.2-201ENST00000559030 4020 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms