Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF31Q96EP0 AC120036.2-201ENST00000509729 1474 ntBASIC6.52□□□□□ -1.37
RNF31Q96EP0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
RNF31Q96EP0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC139426.3-201ENST00000605648 2059 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 RNU4-39P-201ENST00000362455 127 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 RNU6-386P-201ENST00000362650 107 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 RNU1-5P-201ENST00000362684 144 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AF228730.1-201ENST00000397972 663 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 RNU2-18P-201ENST00000411224 162 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 VPS26BP1-201ENST00000417155 755 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 RPL17P17-201ENST00000419491 557 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC017019.1-201ENST00000426129 261 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 HMGB3P5-201ENST00000428894 612 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC245047.1-201ENST00000433276 873 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 CLNS1AP1-201ENST00000435954 682 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC004854.1-201ENST00000440356 349 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC108729.2-201ENST00000476543 840 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 RPS3AP15-201ENST00000483874 781 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 RPL37P23-201ENST00000492641 294 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC105233.1-201ENST00000498840 781 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC011500.1-201ENST00000601963 469 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC089999.3-201ENST00000622440 577 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC013437.2-201ENST00000639587 677 ntBASIC6.51□□□□□ -1.37
RNF31Q96EP0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF31Q96EP0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF31Q96EP0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 AL451064.2-201ENST00000623514 1654 ntBASIC6.5□□□□□ -1.37
RNF31Q96EP0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF31Q96EP0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF31Q96EP0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms