Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR3189-201ENST00000578735 73 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AP005136.2-201ENST00000583253 1049 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC067852.5-201ENST00000589299 310 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC091193.1-201ENST00000604640 448 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC006924.1-201ENST00000610750 559 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 MIR7109-201ENST00000613748 65 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC022507.1-201ENST00000548349 1505 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 OR11H13P-201ENST00000359695 979 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AL445238.1-204ENST00000400311 463 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 RPL24P2-201ENST00000421023 475 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 IGLV3-4-201ENST00000432300 244 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 PPIAP10-201ENST00000438675 458 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 RPL5P7-201ENST00000444235 813 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 CT45A11P-201ENST00000448043 1134 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 RANP2-201ENST00000456833 229 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC019084.1-201ENST00000457337 432 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 RPL34P33-201ENST00000486062 334 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC108103.1-201ENST00000511286 446 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AP005639.1-201ENST00000526939 192 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 RPA2P3-201ENST00000533268 770 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AP001823.1-201ENST00000604056 1003 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC124916.2-201ENST00000604416 224 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC011815.2-201ENST00000618230 2021 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC073488.6-201ENST00000632293 754 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC022726.2-201ENST00000634673 547 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AL596275.2-208ENST00000641192 594 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC119674.1-217ENST00000641942 1086 ntBASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.29□□□□□ -1.4
ECHDC3Q96DC8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 RNU11-6P-201ENST00000391127 133 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 RN7SKP161-201ENST00000411110 305 ntBASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.28□□□□□ -1.4
ECHDC3Q96DC8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms