Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL353625.1-202ENST00000366273 571 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 RNU6-729P-201ENST00000384399 107 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 MIR187-201ENST00000385062 109 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 MIR137-201ENST00000385223 102 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 LDHAP5-201ENST00000394996 622 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL121977.1-201ENST00000401636 979 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL359694.1-201ENST00000403247 604 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL136100.1-201ENST00000407696 330 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC117434.1-201ENST00000419971 836 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 ETF1P1-206ENST00000427296 984 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 RPS10P14-201ENST00000440748 502 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 RPS19P6-201ENST00000441327 433 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL356133.1-201ENST00000444762 372 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 RPL36AP55-201ENST00000454114 305 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC236972.4-201ENST00000458091 963 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC091917.2-201ENST00000505002 744 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AP005902.2-201ENST00000518393 307 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL121579.2-201ENST00000555466 590 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 ANP32BP1-202ENST00000568553 737 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 SNORD39.2-201ENST00000579995 76 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AL159169.2-201ENST00000610061 1269 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC018692.2-201ENST00000624130 348 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 HSPD1P8-201ENST00000400121 1658 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC107021.2-201ENST00000567714 2095 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC105235.1-201ENST00000623208 1816 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC011416.1-201ENST00000514947 1732 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 MIR431-201ENST00000385266 114 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 SNORA79B-201ENST00000410557 148 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC091492.1-201ENST00000419844 272 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 MTCO1P51-201ENST00000427672 1060 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AL845321.1-201ENST00000444603 348 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AL133480.2-201ENST00000456723 487 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 MTND6P32-201ENST00000457611 483 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC022415.1-202ENST00000486612 523 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 ASNSP4-201ENST00000511103 447 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC008676.3-201ENST00000521237 435 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AP005639.1-201ENST00000526939 192 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 SETP17-201ENST00000534163 817 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 SLC25A51P2-201ENST00000535708 889 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC007068.2-201ENST00000543168 395 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTP4A1Q93096 AL162632.2-201ENST00000553933 399 ntBASIC5.86□□□□□ -1.47
PTP4A1Q93096 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.86□□□□□ -1.47
PTP4A1Q93096 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms