Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 AC023968.1-201ENST00000560719 475 ntBASIC6.11□□□□□ -1.43
TM9SF4Q92544 AC007066.2-202ENST00000566531 914 ntBASIC6.11□□□□□ -1.43
TM9SF4Q92544 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 MIR6721-201ENST00000617181 87 ntBASIC6.11□□□□□ -1.43
TM9SF4Q92544 U1.41-201ENST00000617626 165 ntBASIC6.11□□□□□ -1.43
TM9SF4Q92544 AC025262.3-201ENST00000623666 360 ntBASIC6.11□□□□□ -1.43
TM9SF4Q92544 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF4Q92544 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF4Q92544 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF4Q92544 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF4Q92544 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
TM9SF4Q92544 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TM9SF4Q92544 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL731556.1-201ENST00000394628 3711 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 PSMC1P6-201ENST00000477233 1319 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 RNU1-84P-201ENST00000365447 164 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 MIR323B-201ENST00000385269 82 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 RPL12P23-201ENST00000405880 490 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC096537.2-201ENST00000413707 714 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 CRYGGP-201ENST00000443337 145 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 POU5F1P5-201ENST00000445059 658 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL020997.1-201ENST00000446554 349 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 SULT1D1P-201ENST00000458020 882 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 RPL17P2-201ENST00000491913 451 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 RNA5SP441-201ENST00000516809 88 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC006512.2-201ENST00000543250 486 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 CTSLP2-201ENST00000580501 394 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC026898.1-201ENST00000586404 571 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL589765.6-201ENST00000601909 549 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL953862.2-201ENST00000603089 820 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AC091193.1-201ENST00000604640 448 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 AL352984.2-201ENST00000611153 546 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 MIR1910-201ENST00000636955 80 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 ZNF402P-201ENST00000404435 3100 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 Z97989.1-201ENST00000531702 2421 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 AP001157.1-201ENST00000550837 2339 ntBASIC6.1□□□□□ -1.43
TM9SF4Q92544 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM9SF4Q92544 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TM9SF4Q92544 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF4Q92544 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF4Q92544 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF4Q92544 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF4Q92544 MIR188-201ENST00000385034 86 ntBASIC6.09□□□□□ -1.43
TM9SF4Q92544 AC092642.1-201ENST00000392417 425 ntBASIC6.09□□□□□ -1.43
TM9SF4Q92544 RPL7P58-201ENST00000402913 758 ntBASIC6.09□□□□□ -1.43
TM9SF4Q92544 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TM9SF4Q92544 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.09□□□□□ -1.43
TM9SF4Q92544 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM9SF4Q92544 NPM1P25-201ENST00000429734 854 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms