Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGB4Q8WW32 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGB4Q8WW32 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HMGB4Q8WW32 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HMGB4Q8WW32 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AL513548.1-201ENST00000562904 1724 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 RN7SKP275-201ENST00000364626 301 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 MIR7-1-201ENST00000384871 110 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AL356806.1-201ENST00000422524 916 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 RPSAP65-201ENST00000429660 595 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC245452.2-201ENST00000435222 392 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 OR52I1-201ENST00000450052 1050 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 RN7SL221P-201ENST00000466190 281 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC104997.1-201ENST00000519761 717 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC004232.1-201ENST00000571388 208 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 RN7SL753P-201ENST00000581238 290 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC092474.3-201ENST00000603022 568 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 OR7M1P-201ENST00000608946 533 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AC009032.1-201ENST00000617574 431 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 RPL31P11-201ENST00000426558 1558 ntBASIC6.56□□□□□ -1.36
HMGB4Q8WW32 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB4Q8WW32 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC011592.1-201ENST00000624647 3634 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC015871.3-201ENST00000618835 2261 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC139426.3-201ENST00000605648 2059 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MIR199B-201ENST00000384849 110 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 RPL5P5-201ENST00000392009 893 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 RPL5P34-201ENST00000426545 891 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AL645936.1-201ENST00000441979 518 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC010240.2-201ENST00000445363 1205 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 DEFA11P-201ENST00000446470 261 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 RPL5P9-201ENST00000448118 886 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 OR2AF1P-201ENST00000454899 889 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC009963.3-201ENST00000458090 486 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms