Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AL121839.2-201ENST00000565058 6943 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCDC112Q8NEF3 AC096921.2-201ENST00000561507 1916 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 RNA5SP176-201ENST00000390956 110 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AL672212.1-201ENST00000422246 400 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 MRPS21P2-201ENST00000424704 264 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 PSMD8P1-201ENST00000436275 769 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 CHCHD4P5-201ENST00000436684 427 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AC099340.1-201ENST00000475247 599 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 RN7SL37P-201ENST00000490461 307 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 RPL5P14-201ENST00000494197 878 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 COX6B1P4-201ENST00000519826 484 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AC023310.2-201ENST00000553844 547 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AC100832.2-201ENST00000582080 776 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AC027334.1-201ENST00000603257 310 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AL008723.3-201ENST00000608926 449 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 SAMM50P1-201ENST00000455403 1399 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 HSPD1P1-201ENST00000503199 1726 ntBASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.93□□□□□ -1.3
CCDC112Q8NEF3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 SNORD1C-201ENST00000363315 78 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 RPL5P2-201ENST00000429598 854 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AL365220.1-201ENST00000432923 399 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC097486.1-201ENST00000515331 210 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC007068.2-201ENST00000543168 395 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC090616.1-201ENST00000583895 447 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 MIR4428-201ENST00000584884 73 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC073488.9-201ENST00000631601 754 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC003992.1-201ENST00000635364 557 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC092451.3-201ENST00000625067 1343 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AL121768.1-201ENST00000613917 2544 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 TRIM53CP-201ENST00000531490 1354 ntBASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC112Q8NEF3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 AC009220.2-201ENST00000489759 1751 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 MIR187-201ENST00000385062 109 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 PDCL3P5-201ENST00000398028 722 ntBASIC6.91□□□□□ -1.3
CCDC112Q8NEF3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms