Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 SNORA7A-201ENST00000384765 139 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 CYP4F30P-202ENST00000420048 405 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 CDC42P6-201ENST00000421246 576 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 RPL5P2-201ENST00000429598 854 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 RN7SL372P-201ENST00000461982 298 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 RNA5SP75-201ENST00000516841 111 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC026956.1-201ENST00000558741 396 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 RPL29P33-201ENST00000587474 316 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AL445649.1-201ENST00000615941 691 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 AL109924.4-201ENST00000623089 670 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 ZNF101P1-201ENST00000435701 1720 ntBASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC50Q8IVM0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 MIR431-201ENST00000385266 114 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AL353133.1-201ENST00000407695 401 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 RN7SKP281-201ENST00000410472 352 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AL157884.1-201ENST00000424561 454 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 OR13K1P-201ENST00000444577 975 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC103563.5-201ENST00000455643 364 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 EIF3LP2-201ENST00000457262 807 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 RN7SL655P-201ENST00000486087 298 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 RN7SL350P-201ENST00000492591 299 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 OR51A1P-201ENST00000511110 946 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 OR4H6P-201ENST00000563771 921 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AL512413.1-201ENST00000606489 382 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC022726.2-201ENST00000634673 547 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AC135068.11-201ENST00000636378 921 ntBASIC6.65□□□□□ -1.34
CCDC50Q8IVM0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC50Q8IVM0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC087516.1-201ENST00000561236 2428 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AL161912.4-201ENST00000623889 2468 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 RNA5SP308-201ENST00000362532 115 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 SNORD35A-201ENST00000363389 86 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 MEAF6P1-201ENST00000416092 327 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 VPS25P1-201ENST00000455691 508 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 RN7SL221P-201ENST00000466190 281 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC093870.1-201ENST00000506837 213 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 SLC25A51P2-201ENST00000535708 889 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms